Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3130 ATGGGTACTGGTTGGAGAAGAGCCTTTTGTACTCGCGACCCAGAATCCAGAATATCGGATAAGCAGCAAaaaagcccaagcccaagctCAAGCCCGAGTCCGAGAAGCTGTGCAAGGTTGGGTTTTCTGTCCGGCAGCAGCCCCAAATCCCAAAGCAAAAACGCTCCTAAAGCCATTAAGTCTCCCAAAACGCCGTCGACCTCAAATCCAACTTCTCCTCGTTCGCCTTTGAAGTTATCTCTCTTCAGAAACAGCTTCAAATTCAGAAGTAGCTGCGGACTGTGTTTGAACAGCGTGAAGACGGGTCAAGGCACGGCCATTTACACAGCGGAATGTTCTCACGCTTTTCACTTTCCGTGTATTGCTGCCCATGTAAGCAAGCACGGAAGCCTGGTCTGCCCCGTCTGCAACGCCACCTGGAAGGATATACCTCTGCTTGCCCTCCACAAGACTCAATCCTCACAGCAAAACGATaTGAAGCATTCTGATTCAACCAGGTCCTACGATGATGACGAGCCTCTCCTGTCTCCTACCTCCGGAGGCCGAATCATTCCCATACCTGAAGCTGACGAAAGCTTGGAAGAAGATGACGAGGTCGTGGAGGAGTTCCAGGGGTTTTTCGTGAATCCGAAACCTCCTGATCATCACTTGCAATTGCAagcaaaggaaaaagagaattCCAGAAATGTTGAGGCGAAGTTGGTGGGGGAGTGTGCTGTAATATCAATCTCTCGTAGCCACCAGAGTTGGGCTTTGGTTCTCAAAGTGAAGGCTCCACCTcgtaatagtaatGACCCTTCCCAACGGGCACCCATAGATCTGGTCACGCTTCTTGACGTGAGTGGCAGCATGACAGGTGCCAAGCTTCACATGCTAAAGCGCGCGATGCGTTTGGTTATTTGTTCTCTGGGCCCAGCCGATAGGCTCTCCATTGTGGCATTTTCCTCTGTAGCCAAACGGTTGCTACCTCTCAGAAGAATGTCGCCTCAGGGCCAGCGTGTGGCTCGCCGCATCGTTGACCGCCTTGTATGTGGCCAAGGAACTTGCGTGGCTGACGCTTTGAGGAAAGCCAACAAAGTGCTTGAGGACCGAAGGGAGAGAAACCCAGTGGCCAGCGTCATGCTCCTATCCGACGGTCAAGATGAGAGAGTCCAACCTACCAATCAACCAAAATGCTCCACCCACGTGTCTTCCACTTCCACCCGGTTCGCCCACATCGAGATCCCGGTTCACGCGTTTGGGTTTGGACACAGAGCCCACTACAGCCAGAGCCAGGAGCCGGCTGAGGATGCGTTTGCCAAATGCGTGGGTGGGTTATTGAGTGTGGTGGTGCAAGACTTGAGGATTCAGCTTGGGTTTCAGTCTGGCTCGGCGCCGGCTGAAATCAGCGCCGTTTATTCTTGCAGCGGAAGGCCAACGGCTCTGGTCAGCTCAGGTTCGGTGCGGCTGGGCGATTTGTACGCTGAAGAACAGAGGGAGTTACTGTTGGAGGTGAGAATTCCCGCGTCGGCTTTGGGGTCCCACTCCCACCACGTGATGTCGGTACGGTGCGTTTACAAGGACCCTGCCACTCAGGAAATTGTCTACGGTAGGGAAGAGGGGCTAGTGGTGCCGCCAGCTCAGAGTGCACGAGGTTCCGGTGCCAGAATCGAGAGGCTGAGGAATTTGTTCGTAACTACGAGAGCCATAGCTGAATCTCGTAGATTGGTGGAGCACAATGATTTCACAACCGCGCATCATCTGTTGGCTTCGGCGCGAGCACTTTTGATGCAGTCCAGCTCCATTTCGGCTGATGAGTTCATACGCGGCTTGGAAGCTGAGCTGGCAGACCTGCATTGGCGGAGGCGGAGGAGAGGGAGCGAAAGGGAGAGTTCGTTGGTGGATGAAGATGGCGAGCCGCTCACGCCGACATCGGCTTGGAGAGCGGCTGAGAAGCTGGCGAAGATGGCAATGATGAAGAAGTCGTTAAATCGAGTCGGCGACTTGCACGGCTTCGAAAATGctaggttttaa 2013 0.5246 MGTGWRRAFCTRDPESRISDKQQKSPSPSSSPSPRSCARLGFLSGSSPKSQSKNAPKAIKSPKTPSTSNPTSPRSPLKLSLFRNSFKFRSSCGLCLNSVKTGQGTAIYTAECSHAFHFPCIAAHVSKHGSLVCPVCNATWKDIPLLALHKTQSSQQNDMKHSDSTRSYDDDEPLLSPTSGGRIIPIPEADESLEEDDEVVEEFQGFFVNPKPPDHHLQLQAKEKENSRNVEAKLVGECAVISISRSHQSWALVLKVKAPPRNSNDPSQRAPIDLVTLLDVSGSMTGAKLHMLKRAMRLVICSLGPADRLSIVAFSSVAKRLLPLRRMSPQGQRVARRIVDRLVCGQGTCVADALRKANKVLEDRRERNPVASVMLLSDGQDERVQPTNQPKCSTHVSSTSTRFAHIEIPVHAFGFGHRAHYSQSQEPAEDAFAKCVGGLLSVVVQDLRIQLGFQSGSAPAEISAVYSCSGRPTALVSSGSVRLGDLYAEEQRELLLEVRIPASALGSHSHHVMSVRCVYKDPATQEIVYGREEGLVVPPAQSARGSGARIERLRNLFVTTRAIAESRRLVEHNDFTTAHHLLASARALLMQSSSISADEFIRGLEAELADLHWRRRRRGSERESSLVDEDGEPLTPTSAWRAAEKLAKMAMMKKSLNRVGDLHGFENARF 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3130 670 Pfam RING-like zinc finger 92 121 IPR001841 -
Sto9g3130 670 ProSiteProfiles Zinc finger RING-type profile. 92 137 IPR001841 -
Sto9g3130 670 SUPERFAMILY vWA-like 271 430 IPR036465 -
Sto9g3130 670 CDD RING-H2 92 137 - -
Sto9g3130 670 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 183 IPR013083 -
Sto9g3130 670 MobiDBLite consensus disorder prediction 151 184 - -
Sto9g3130 670 MobiDBLite consensus disorder prediction 43 76 - -
Sto9g3130 670 PANTHER E3 UBIQUITIN-PROTEIN LIGASE WAV3 3 670 - -
Sto9g3130 670 SMART VWA_4 271 457 IPR002035 -
Sto9g3130 670 Pfam von Willebrand factor type A domain 274 380 IPR002035 -
Sto9g3130 670 SMART ring_2 92 136 IPR001841 -
Sto9g3130 670 Gene3D von Willebrand factor, type A domain 273 437 IPR036465 -
Sto9g3130 670 MobiDBLite consensus disorder prediction 21 37 - -
Sto9g3130 670 MobiDBLite consensus disorder prediction 1 76 - -
Sto9g3130 670 SUPERFAMILY RING/U-box 91 142 - -
Sto9g3130 670 CDD vWA_C3HC4_type 272 444 - -
Sto9g3130 670 ProSiteProfiles VWFA domain profile. 273 462 IPR002035 -
Sto9g3130 670 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 3 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3130 Sto-Chr9 31932240 31934585 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3130 - - gmx:100782780 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3130 9 31932240 31934585 Sto9g3130 9 31932240 31934585 ECH