Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3093 ATGGAGACGACGGAGAAAGATTTTATGGTGCACGATATCGTGCTGCAAATTATTCTAATTCTTCTCATGGTGTTCATGTTCTTGTATATGCACGATATTCCCAAGAAGCTCTTCGCTAAGCTCCGCCTCAGAAACCGATCCGAAGTTCAAGCCAAGCGTCACTTCGTACAAGGTGCTCAGCTCCTGGCGCGAGCCAGATCTTCCAAGTCTCGCTCCGCTTCGAACTCTCTGGCCAAGGAGGCCGTAGCCGAAGCCGAAAAAGCCATTGCGCTTGATCCCAAGGATGCAGCCGCTTACCTTCTCAAAGCCCTGGCTCTTGATCTCCAAGGCTACAGGCCTTCGGCTCTTGATTCGATCGACATGGCTTTATCTCCGCTCGCCGTCAAGTCCCTGGCTGATAACGAGAAAGGGGACGCGCTTCTCAAGAGGGCTGAGATGAAAATGGCTATGAATGACCGCGGCCGGCTCGATTCGGCTCTGGCTGATTTGACTGAGTCGGTAAAGCTGAATTCGAAAAACGTCAGAACTTTTTGTTTGTTAGGGCAATGCTATGAAGCAAAGAAGATGAAAGAGGAAGCCAGGAAGGCTTACGAGGAGGCTCTCCAGATTGAGCCCCAATCAGATGTGGCTCAAGAGGCACTAAAGAGTTTGGATTCATAG 660 0.5045 METTEKDFMVHDIVLQIILILLMVFMFLYMHDIPKKLFAKLRLRNRSEVQAKRHFVQGAQLLARARSSKSRSASNSLAKEAVAEAEKAIALDPKDAAAYLLKALALDLQGYRPSALDSIDMALSPLAVKSLADNEKGDALLKRAEMKMAMNDRGRLDSALADLTESVKLNSKNVRTFCLLGQCYEAKKMKEEARKAYEEALQIEPQSDVAQEALKSLDS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3093 219 Gene3D Tetratricopeptide repeat domain 45 130 IPR011990 GO:0005515
Sto9g3093 219 ProSiteProfiles TPR repeat profile. 174 207 IPR019734 GO:0005515
Sto9g3093 219 PANTHER - 11 216 - -
Sto9g3093 219 Gene3D Tetratricopeptide repeat domain 131 219 IPR011990 GO:0005515
Sto9g3093 219 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 11 216 - -
Sto9g3093 219 Pfam Tetratricopeptide repeat 175 206 IPR001440 GO:0005515
Sto9g3093 219 SUPERFAMILY TPR-like 79 208 IPR011990 GO:0005515
Sto9g3093 219 SMART tpr_5 137 173 IPR019734 GO:0005515
Sto9g3093 219 SMART tpr_5 174 207 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3093 Sto-Chr9 31676961 31677620 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3093 - - gmx:100799725 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3093 9 31676961 31677620 Sto9g3093 9 31676961 31677620 ECH