Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3079 ATGAAGGCCTACTTCATTCTTTTCTCTGCTCTTCACATCTTCATTATTGTTACCACTACTATGGGCGCCTATGATCCTTGCTCTTCTCAACCCGACGACTCCGACCTCACCCTCATTCCCATCTACGCCAAATGCTCACCCTTTGACCCACACCCACCCGCCACCGATTCATGGGTCAACACCGTCCTCACCATGGCCTCCAAAGACCCACAGCGCCTCACCTACTTGTCCAGCCTTGTGGGCCGGAAGTCCTCCGCCCCCATTGCATCGGGCCAGGCCTTCAATATCGGCAACTACGTGGTCCGGGCCAGACTCGGCACTCCGGCCCAGCTCATGTTCATGGTCCTAGACACCAGTAGCGATGAGGCCTGGGTCCCATGCTCCGGCTGTACTGGGtgctccaccaccaccaccaccttctCCCCCAGAGATTCTTCCAGTTTCGGCTCATTATATTGCTCCGCCCCGCAATGCAGTCAGGTCCGTGGACTCTCCTGCCCCGCCACAGGATCCGCCCCGTGTTCCTTTAACCATTCCTACGCTGGTTCTTCCTTTTCCGCCAAACTGGTTCAAGATTCTCTCAAATTAGCCTACGATGTTATCCCCCATTTTTCCTTCGGTTGCATCGACAGCATTTCTGGTGGTCCCGGTCTCGTTCCCTCCCAAGGCCTATTGGGCCTGGGGCGAGGGCCCATGTCGTTGCTTTCGCAATCCGGGTCTCTCTATTCCGGTGTGTTCTCTTATTGTCTTCCCAGCTTCAAGTCCTACTACTTCTCCGGGTCACTGAAACTGGGGCCCAAGGGTCAGCCCAGGAGAATCCGAACTACTCCGCTTCTGCGTAACCCACGCCGGCCGTCTCTGTACTATGTGAATTTAACCGGAGTTAGTGTGGGCCGGGTTCTGGTTCCTGTGCGGAGTGAGCTTTTGGGGTTTAACCCGTATACGGGATCCGGAACCATAATAGATTCGGGTACGGTGATAACCCGATTCGTAGAACCGGTGTATAGTGCGATCAGGGAGGAGTTTAGGAGACAGGTGGAAGGTCCATTCTCGAGCATAGGGGCATTTGATACATGCTTTGTGAAGAGGTACGAGACATTGGCACCAATTATTACGCTGCATTTCACGGGTTTGGACCTGAAATTGCCATTTGAGAACAGCTTGCTACATAGTAGTTCGGGGTCGCTAGCATGCTTGGCAATGGCGGCGGCACCCAATAATGTGAACTATGTGTTGAATGTGATCGCTAACTTGCAGCAACAGAACcttaggattttgtttgatacTGTGAAAAATAAGATTGGCATAGCCCGTGAGCTCtgtaactaa 1329 0.5139 MKAYFILFSALHIFIIVTTTMGAYDPCSSQPDDSDLTLIPIYAKCSPFDPHPPATDSWVNTVLTMASKDPQRLTYLSSLVGRKSSAPIASGQAFNIGNYVVRARLGTPAQLMFMVLDTSSDEAWVPCSGCTGCSTTTTTFSPRDSSSFGSLYCSAPQCSQVRGLSCPATGSAPCSFNHSYAGSSFSAKLVQDSLKLAYDVIPHFSFGCIDSISGGPGLVPSQGLLGLGRGPMSLLSQSGSLYSGVFSYCLPSFKSYYFSGSLKLGPKGQPRRIRTTPLLRNPRRPSLYYVNLTGVSVGRVLVPVRSELLGFNPYTGSGTIIDSGTVITRFVEPVYSAIREEFRRQVEGPFSSIGAFDTCFVKRYETLAPIITLHFTGLDLKLPFENSLLHSSSGSLACLAMAAAPNNVNYVLNVIANLQQQNLRILFDTVKNKIGIARELCN 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3079 442 Gene3D Acid Proteases 79 265 IPR021109 -
Sto9g3079 442 Pfam Xylanase inhibitor C-terminal 288 437 IPR032799 -
Sto9g3079 442 SUPERFAMILY Acid proteases 92 441 IPR021109 -
Sto9g3079 442 PANTHER ASPARTYL PROTEASE AED3-LIKE 11 442 - -
Sto9g3079 442 Pfam Xylanase inhibitor N-terminal 99 265 IPR032861 -
Sto9g3079 442 Gene3D Acid Proteases 266 442 IPR021109 -
Sto9g3079 442 PANTHER ASPARTYL PROTEASES 11 442 IPR001461 GO:0004190|GO:0006508
Sto9g3079 442 ProSiteProfiles Peptidase family A1 domain profile. 99 437 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3079 Sto-Chr9 31567879 31569207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3079 89 442 Miscellaneous Gene Families AT1G77480 26.972 1.31e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3079 - - gmx:100816307 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3079 9 31567879 31569207 Sto9g3079 9 31567879 31569207 ECH