Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3078 ATGGGTGTCAAAGGCTTTGTTGAAGGCGGTATTGCTTCCATCGTTGCCGGATGCACTACTCATCCACTTGATCTCATCAAAGTTCGAATGCAGCTTCAAGCTTTAGCCTTTCACTCACAATTTCCGGCGACGGCGGCTCCTCCGACAACCATACTCGGTCTTCAACGTCGGGCTGGACCTATATCGGTTGGTGTGCGCATTGTTCAGTCCGAAGGCGTCGCTGCCCTGTTCTCCGGTGTATCCGCCACCGTACTCCGCCAAACACTCTATTCCACCACCCGTATGGGTCTATACGATGTGCTCAAGCATAAATGGGCCGATCCGGATGCGGGTAATATGCCCCTGATCCGGAAGATAGCGGCGGGGCTAATCGCCGGCGGGATTGGTGCAGCCATTGGGAATCCTGCTGACGTGGCGATGGTACGAATGCAAGCCGATGGTCGGCTTCCGGCGGCTCAACGGCGCGGCTACAAAGGCGTGTTCGACGCGATCATGCGCATGTCGAGTGAGGAAGGAATTGCTAGCCTGTGGCGCGGTTCGGCTCTTACGGTGAACCGCGCGATGATCGTGACGGCTTCTCAATTGGCGTCGTATGATCAGTTCAAGGAGATGATTCTGGCCAAGGGTTTGATGAAGGATGGGCTGGGGACTCACGTCACGGCGAGTTTCGCGGCGGGTTTTGTGGCGGCGGTGGCGTCGAATCCGGTGGATGTGATAAAGACAAGAGTGATGAACATGAAGGTGGAGGCAGGGGCAACCCCACCGTATAATGGGGCTTTGGATTGTGCATTGAAGACAGTCAGAGCTGAAGGACCTATGGCCCTGTATAAGGGATTTGTTCCTACAATTTCAAGGCAGGGGCCTTTTACTGTGGTGCTGTTTGTGACCCTTGAACAAGTCAGGAAGTTGCTCAAGGAATTTTGA 924 0.5465 MGVKGFVEGGIASIVAGCTTHPLDLIKVRMQLQALAFHSQFPATAAPPTTILGLQRRAGPISVGVRIVQSEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKHKWADPDAGNMPLIRKIAAGLIAGGIGAAIGNPADVAMVRMQADGRLPAAQRRGYKGVFDAIMRMSSEEGIASLWRGSALTVNRAMIVTASQLASYDQFKEMILAKGLMKDGLGTHVTASFAAGFVAAVASNPVDVIKTRVMNMKVEAGATPPYNGALDCALKTVRAEGPMALYKGFVPTISRQGPFTVVLFVTLEQVRKLLKEF 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3078 307 Pfam Mitochondrial carrier protein 113 206 IPR018108 -
Sto9g3078 307 Pfam Mitochondrial carrier protein 4 105 IPR018108 -
Sto9g3078 307 Pfam Mitochondrial carrier protein 216 305 IPR018108 -
Sto9g3078 307 PANTHER DICARBOXYLATE CARRIER PROTEIN 1 307 - -
Sto9g3078 307 Gene3D Mitochondrial carrier domain 4 306 IPR023395 -
Sto9g3078 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 303 IPR018108 -
Sto9g3078 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 204 IPR018108 -
Sto9g3078 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 104 IPR018108 -
Sto9g3078 307 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 1 307 - -
Sto9g3078 307 SUPERFAMILY Mitochondrial carrier 4 300 IPR023395 -
Sto9g3078 307 PRINTS Mitochondrial carrier protein signature 5 18 IPR002067 GO:0055085
Sto9g3078 307 PRINTS Mitochondrial carrier protein signature 18 32 IPR002067 GO:0055085
Sto9g3078 307 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Sto9g3078 307 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3078 Sto-Chr9 31565293 31566252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3078 1 306 Miscellaneous Gene Families AT5G09470 57.817 3.08e-119 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3078 K15104 - zju:107421308 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3078 9 31565293 31566252 Sto9g3078 9 31565293 31566252 ECH