Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3077 ATGAGGAGGAGAGGAGTTGACAGAGAGAGTAGGGAGGCGAGGGAAGGAGGTGGAGGGGTAGGATTGAGAGATGCGGTGGACGGACGGAGAGGGTGTATGGTTGATGCCGTCTGTGGTGAGAGGGATGatatgattaacaaaattgCGGAATTGTCTCAGGGAGATGGCGGTGTTTCTCAACCCACTCCTCAGCCTGGGCTACTAGATCATCAGCGTTCACGGGGCAATAACGGCAGCAGCAACAACAATACGAGTGCTGTTCCCCAGAAGGGGAGTGAAGTGAACCTAACCCTTGGTGGCATTGACCTCAACAATTCAGGCAGCGTTGTTGTCAAAGCTGACAAGAAACTTTTGACTGTACTTTTTCCTGATGGACGTGCTTTCACACTTAAGGCTGACACTACAGAGGACTTGTATGAGTGGAAGACTGCACTTGAGAATGCTTTGGCGCAAGCCCCGAGTGCCTCTAATGTAACGGGGCAAAATGGTATCTTCAGGAACGATCAGATTGATTCAATTGATATTTCTTTGGACCAGTCGAAAGATGTAGAACCAGTTAAATCTACAGTTATTGGCCGGCCAATTTTACTTGCTCTAGAGGATGTTGATGGAGCTCCATCATTTTTGGAGAAAGCCCTGCGGTTCGTAGAAGAGCATGGAGTCAAAGTTGAAGGGATCTTGCGACAAGCAGCTGATGTTGAGGATGTTGAACGTCGACTTCGAGAATACGAACAAGGAAAAACTGAATTCTCTCCTGAGGAGGATGCACATGTTGTTGCTGATTGTTTAAAGTATGTACTCCGGGAATTACCTTCATCTCCAGTCCCTGCATCTTGCTGTAAGGCTCTGTTAGAAGCATGCCGAACTGAACGTGGTGGTAGGATTTCTGCTATCCGGGGAGCAATATGTGAGACTTTCCCTGAACCAAATCGTCGTTTATTGCAAAGAATACTCCAAATGATGCAAATTGTGGCTTCCAACAAAACTGTGAACAGAATGAGCTCCTCAGCTGTGTCAGCTTGCATGGCACCCTTACTTCTTCGTCCCCTTCTGGCTGGGGAATGTgaaattgaaaatgattttgATGTTGGTGGTGATGGTTCTCTTCAACTTTTACAAGCAGCTGCAGCAGCTAACCATGCTCAAACAATTGTTATTACTTTATTAGAAGAATATGACAGCATATTTGGGGAAGGTACTGGGTCCCCTGATATATACAGCGACTCGGAAGAGAGTGGATCTGAGACTGAGGATGGTACCGAAGATGATGATTATGacgatgaggaggaggaggaggaggattaTGATGATGAATGTGATGAATCAATACAAGAGTCTGATGGAGATGCAGATGATGGTCTTGTTAACGAAATATGTGGTGAGACTGAAGAACCGGGGGGAAAGAATGATAAGAACCATGATCGTGCTAGATCCGATGTAAAATCCTCCGGTATGAATGAAGATGCTAAAGTCAACCAGATGTCATTAAAGTCAAATGAAGTCTCACTGCCTCAGAATGACAATATCAAAAGCAATGAAAATATGATGAGTTCAGTGAAGACAGATTCTGCAGAAAAGTCCAATGCGCCTGACATAGTTGAAGGTGTTTCCACAGATCAGAGTACGACGCACAATTCGAGTTGTTCTAGTGCCAACATATCTACAAGCATATCCAACGGTCCAGCACTTTCTTCAAGCCAGACAGTATTGGGGCGTACCGCTGCAATGAAGAATCTGACCTTGGAACCCGTTGATGATTCCACTGATGAAGCTGAGATTGAAACTCTTGAAGCTATTAAGGCAGAATTGCAAAACCAAATTGCAGAGGAGAAGGCAAACCTGCATTGTTATAtggaaaaacaacagaaagccATGCATGAGCGTCGTTTGTCTCTTGAGCAAGATGTAGCTAGACTACAGGAACAGCTGCAAAAGGAGAAGATTTCTCGGTCAGCTTTTGAAGGAGGATTCAAGTATTCTCCCAGACCCTCATCTGATTCTTCAAGTATTGATGAAAAGACCAAGGCAGATCTTGAGGAATTAATTCAGATAGAAATAGATCTCCACAAGTTACAGCGGCGTATTGATGACCTTGGTGCGCGGCTTAATTTACAACGTGAACAGAATTATGGTTCTGCATTGGATTTCTACAATCAACCCCAGCAGAATTCAAATCCTGAAACAAAGTTGAAGAATAAGCTGGATACTGAAGTTGCTGCGACTTCACAGCTTGAAAAGTCAAGAAACAAGGACGCTAATTTTGGTGCAGccgaaagtgagaatgaaaaaaagCCGGAACCAACAAATTTACTAAAATTCCCACCTCATCTTGGTTCCAAGAAATCTGTCCCAAAAGTTGAGGTACCAAACTTCACTACATCACTGAACAAACTGACAACCAAACTAAACTTTATGAAGGAGCGTCGTGGTCAACTTCAGCAATTACTGCCATCTCCCAATAGTAAGTCTCGAGGATCTGAAACTCAGCCTTTAACGAACCCAGAAAAGGGTAAACCCATGGACGGTCTCCAGCCATCCCAGACTCAAGATAAAGGTTCAGGCAAAGAAGCTCAATCAGTCCAAAGTTCAGAGAAGTTGAGAAAATCAGATAGTCAGCTAACGCATCACTCAGataataaatggaatcaaaATCAACACTTGGAAAGAGGAAAGTCAGAATGCCATCATCAATCTTATAACGTGGATAAAGCTCTAGGGAATCCTATGGGTTGTCGTATAAAGCTCCGTGAAACTAAAGTAGATTACATAAAGTGTACTGTGACTGCAAATACGGAGGCCATCGTCATCGTCGCCAAAACCTCCATCACTGTCGTCGAAACCTCTGTAGCCGTTGCCATCTTCGAAACCTCCGTCCCCGTCATCGTCGCCACCGTTCAGGTCACATTTGGATTTTCTTCTTTGTCATCTCGCGTGGTTTCTTTCTATTTCCTTGCTTCCATTTGGCTTGCTGTGAACTATGAATAA 2985 0.4265 MRRRGVDRESREAREGGGGVGLRDAVDGRRGCMVDAVCGERDDMINKIAELSQGDGGVSQPTPQPGLLDHQRSRGNNGSSNNNTSAVPQKGSEVNLTLGGIDLNNSGSVVVKADKKLLTVLFPDGRAFTLKADTTEDLYEWKTALENALAQAPSASNVTGQNGIFRNDQIDSIDISLDQSKDVEPVKSTVIGRPILLALEDVDGAPSFLEKALRFVEEHGVKVEGILRQAADVEDVERRLREYEQGKTEFSPEEDAHVVADCLKYVLRELPSSPVPASCCKALLEACRTERGGRISAIRGAICETFPEPNRRLLQRILQMMQIVASNKTVNRMSSSAVSACMAPLLLRPLLAGECEIENDFDVGGDGSLQLLQAAAAANHAQTIVITLLEEYDSIFGEGTGSPDIYSDSEESGSETEDGTEDDDYDDEEEEEEDYDDECDESIQESDGDADDGLVNEICGETEEPGGKNDKNHDRARSDVKSSGMNEDAKVNQMSLKSNEVSLPQNDNIKSNENMMSSVKTDSAEKSNAPDIVEGVSTDQSTTHNSSCSSANISTSISNGPALSSSQTVLGRTAAMKNLTLEPVDDSTDEAEIETLEAIKAELQNQIAEEKANLHCYMEKQQKAMHERRLSLEQDVARLQEQLQKEKISRSAFEGGFKYSPRPSSDSSSIDEKTKADLEELIQIEIDLHKLQRRIDDLGARLNLQREQNYGSALDFYNQPQQNSNPETKLKNKLDTEVAATSQLEKSRNKDANFGAAESENEKKPEPTNLLKFPPHLGSKKSVPKVEVPNFTTSLNKLTTKLNFMKERRGQLQQLLPSPNSKSRGSETQPLTNPEKGKPMDGLQPSQTQDKGSGKEAQSVQSSEKLRKSDSQLTHHSDNKWNQNQHLERGKSECHHQSYNVDKALGNPMGCRIKLRETKVDYIKCTVTANTEAIVIVAKTSITVVETSVAVAIFETSVPVIVATVQVTFGFSSLSSRVVSFYFLASIWLAVNYE 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3077 994 MobiDBLite consensus disorder prediction 410 458 - -
Sto9g3077 994 MobiDBLite consensus disorder prediction 751 769 - -
Sto9g3077 994 Coils Coil 226 246 - -
Sto9g3077 994 Pfam RhoGAP domain 206 349 IPR000198 GO:0007165
Sto9g3077 994 Pfam Leucine-zipper of ternary complex factor MIP1 625 703 IPR025757 -
Sto9g3077 994 CDD RhoGAP 206 344 - -
Sto9g3077 994 MobiDBLite consensus disorder prediction 1 18 - -
Sto9g3077 994 SMART RhoGAP_3 203 393 IPR000198 GO:0007165
Sto9g3077 994 Coils Coil 425 445 - -
Sto9g3077 994 SUPERFAMILY GTPase activation domain, GAP 205 398 IPR008936 GO:0007165
Sto9g3077 994 Gene3D Rho GTPase activation protein 175 397 IPR008936 GO:0007165
Sto9g3077 994 Coils Coil 593 620 - -
Sto9g3077 994 ProSiteProfiles Rho GTPase-activating proteins domain profile. 197 396 IPR000198 GO:0007165
Sto9g3077 994 Coils Coil 681 708 - -
Sto9g3077 994 Coils Coil 622 649 - -
Sto9g3077 994 MobiDBLite consensus disorder prediction 463 484 - -
Sto9g3077 994 MobiDBLite consensus disorder prediction 814 833 - -
Sto9g3077 994 MobiDBLite consensus disorder prediction 53 91 - -
Sto9g3077 994 MobiDBLite consensus disorder prediction 868 894 - -
Sto9g3077 994 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 83 818 - -
Sto9g3077 994 MobiDBLite consensus disorder prediction 485 525 - -
Sto9g3077 994 SUPERFAMILY PH domain-like 94 157 - -
Sto9g3077 994 MobiDBLite consensus disorder prediction 52 91 - -
Sto9g3077 994 MobiDBLite consensus disorder prediction 842 867 - -
Sto9g3077 994 MobiDBLite consensus disorder prediction 399 564 - -
Sto9g3077 994 MobiDBLite consensus disorder prediction 533 564 - -
Sto9g3077 994 MobiDBLite consensus disorder prediction 741 785 - -
Sto9g3077 994 Coils Coil 795 815 - -
Sto9g3077 994 MobiDBLite consensus disorder prediction 814 894 - -
Sto9g3077 994 MobiDBLite consensus disorder prediction 1 24 - -
Sto9g3077 994 MobiDBLite consensus disorder prediction 652 672 - -
Sto9g3077 994 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1 83 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3077 Sto-Chr9 31541569 31559104 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3077 - - gsj:114415231 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3077 9 31541569 31559104 Sto9g3077 9 31541569 31559104 ECH