Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3008 ATGGATGTAGAGTGTGGTTCATACTTGACAACGCATGCAAAATCAGCAGTATTGCAGAAAAAATTACCAGTATCTGAAGTAGACCGTGCCCTTCACAACCTATTCTCCATTAGAATAAGATTAGGTCTCTTTGATGGGAATCCCTCCAAACTCTCATTCGGCATGATAGCTCCCAATGAAGTGTGTTCAAAACAGCACCTTTATTTAGCTCTTGAAGCCGCCAGAAATGGTATAGTCCTCTTGAAGAACTCTGCTAAACTTCTCCCTCTCCCCAAAACAATTTCCCTTGCACTCATAGGCCCTAACGCCAATGCTCCTCAGACTCTTATAGGAAACTACGCAGGCCCTGCCTGTAAAATCATCACGCCATTGCAAGCCTTTCAGCACTATGTGAAGAACACCATTTATCACCCTGGTTGTGATGGTGGGGTTAAGTGTCCTTCCGCTCAGATAGACCAAGCTGTGGAAATTGCCAAGAAGGTGGATTATGTGGTGCTCATTATGGGATTGGATCAAAGTCAGGAGAGAGAAGATCGTGATCGTGTGCACCTGGATTTACCAGGCAAGCAACAGGAACTCATCAATAGTGTTGCTAAAGCTTCTAAGAGACCTGTGGTTTTGGTGCTCCTTAGTGGAGGCCCTGTAGATATTTCTTCAGCTAAGTTTGACAACAAAATTGGAGGCATTTTCTGGGCTGGTTATCCCGGAGAAGTTGGAGCCATTGCTCTTGCTCAGATTATCTTTGGAGGAAGATTACCAATAACTTGGTACCCAAAGGATTTCATAAGAGTGCCAATGACAGACATGAGGATGCGCGCTGATCCATCATCTGGCTATCCTGGCCGAACCTACCGGTTTTACACAGGTCCAAAGGTGTATGAGTTTGGGTACGGCCTAAGCTACACAAAATACTCCTATGAGTTCGTCTCTGTCACACACAACAAACTTCATTTCAATCAATCGTTGTCTCATTTGATGGATTCTGAAACCAATATCCCTTACAAGTTAGTTTCAGAGTTGGGCACTGAAACTTGCGAAAGCATGTCAGTGTCAGTGACAGTTGGAGTTAAAAATCATGGAAGTATGGTGGGGAAGCATCCGGTGTTGCTATTTACAAAGCACGCAAAAGAGATAAATGGAAATCCGATCAAACAGTTGGTGGGTTTTGAGAGTGTGATGCTAGATGGAGGGGAAAGTGCACAAGTTGGATTTGAACTAAGCCCTTGTGAGCACTTGAGCAGAGCAAAGGAAGATGGTTCCAAAGTGATTGAACAAGGTTCTCATTTGCTGCTTTTGGGGGATCAACATTTTCCAATTGATATCATTATCTGA 1332 0.4384 MDVECGSYLTTHAKSAVLQKKLPVSEVDRALHNLFSIRIRLGLFDGNPSKLSFGMIAPNEVCSKQHLYLALEAARNGIVLLKNSAKLLPLPKTISLALIGPNANAPQTLIGNYAGPACKIITPLQAFQHYVKNTIYHPGCDGGVKCPSAQIDQAVEIAKKVDYVVLIMGLDQSQEREDRDRVHLDLPGKQQELINSVAKASKRPVVLVLLSGGPVDISSAKFDNKIGGIFWAGYPGEVGAIALAQIIFGGRLPITWYPKDFIRVPMTDMRMRADPSSGYPGRTYRFYTGPKVYEFGYGLSYTKYSYEFVSVTHNKLHFNQSLSHLMDSETNIPYKLVSELGTETCESMSVSVTVGVKNHGSMVGKHPVLLFTKHAKEINGNPIKQLVGFESVMLDGGESAQVGFELSPCEHLSRAKEDGSKVIEQGSHLLLLGDQHFPIDIII 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3008 443 Pfam Fibronectin type III-like domain 368 434 IPR026891 -
Sto9g3008 443 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 78 304 IPR036881 GO:0004553|GO:0005975
Sto9g3008 443 PANTHER SUGAR HYDROLASE-RELATED 1 442 IPR044993 GO:0009044|GO:0045493
Sto9g3008 443 Gene3D - 63 302 IPR036881 GO:0004553|GO:0005975
Sto9g3008 443 PANTHER GLYCOSIDE HYDROLASE FAMILY 3 PROTEIN 1 442 - -
Sto9g3008 443 SMART Fn3_like_2 366 436 IPR026891 -
Sto9g3008 443 Gene3D Immunoglobulins 333 441 IPR013783 -
Sto9g3008 443 Pfam Glycosyl hydrolase family 3 C-terminal domain 78 301 IPR002772 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3008 Sto-Chr9 31066103 31067814 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3008 1 439 Glycoside Hydrolase AT1G78060 59.598 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3008 - - aprc:113867121 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3008 9 31066103 31067814 Sto9g3008 9 31066103 31067814 ECH