Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3006 ATGAGCGTGGATCCAAACAGCACTATCTCCAATGGCCATGAGACTAGTTTAATATCACAAGAGCAACAGGCAAAGCTGAATGAGGTGAGAAAGCTTATAGGGACATTGTCAGATAAGGCATCAGTTTACTGTTCTGATGCATCCATCTCAAGGTATTTAAGAGCACGAAATTGGAATGTCAAGAAGGCCGCTAAAATGTTGAAACAGACCTTAGAATGGAGATCAGAATACAAACCCGAGGAGATCCGCTGGGAAGAGGTTGCCAATGAAGCGGAGACTGGTAAGATATATAGATCAAATTATACTGACAAGCACGGGAGGACAGTCCTTGTAATGAGACCTAGTCGTCAGAACTCAAAGTCAATTAAGGGGCAGATTAAATATCTGGTGTACTGCATGGAGAACGCTATTTTAAATCTTGCAGCAGAGCAGGAGCAGATGGTGTGGCTAATTGATTTCGACGGTTTCAATTTGTCGCATATATCAGTGAAGGTTACACGTGAAACTGCCTACGTTTTACAAAACCATTATCCAGAACGATTGGGTCTGGCAATACTGTACAATCCTCCTAAGTTCTTTGAACCATTCTTCACGATGGTAAAGCCCCTATTAGAGCCTAAGACGTACAATAAAGTCAAGTTTGTTTACTCAAATGATCACAACACCAAGAAGGTTATGGAGGATCTGTTTGACATGGACCTTCTGGAGTCTTCATTTGGTGGGAACAATAACATTGGATTTGACATCAATATATATGCTGAGAGAATGAAAGAGGATGACAAGAAGATGCCCTCTTTTTGGACAAGGGCAAACTCTCCGTCGTCAGTCACACAAGATGCTCCTTCTTTAGGACCCATCAGGCTAGACTCAGATTCTAATGCTTCTGAGAATGAGAAATTGCATGCCTGA 909 0.4191 MSVDPNSTISNGHETSLISQEQQAKLNEVRKLIGTLSDKASVYCSDASISRYLRARNWNVKKAAKMLKQTLEWRSEYKPEEIRWEEVANEAETGKIYRSNYTDKHGRTVLVMRPSRQNSKSIKGQIKYLVYCMENAILNLAAEQEQMVWLIDFDGFNLSHISVKVTRETAYVLQNHYPERLGLAILYNPPKFFEPFFTMVKPLLEPKTYNKVKFVYSNDHNTKKVMEDLFDMDLLESSFGGNNNIGFDINIYAERMKEDDKKMPSFWTRANSPSSVTQDAPSLGPIRLDSDSNASENEKLHA 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3006 302 SUPERFAMILY CRAL/TRIO N-terminal domain 18 86 IPR036273 -
Sto9g3006 302 SMART sec14_4 90 244 IPR001251 -
Sto9g3006 302 CDD SEC14 92 242 IPR001251 -
Sto9g3006 302 MobiDBLite consensus disorder prediction 267 281 - -
Sto9g3006 302 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 84 247 IPR001251 -
Sto9g3006 302 SMART CRAL_TRIO_N_2 45 70 IPR011074 -
Sto9g3006 302 PANTHER CRAL-TRIO LIPID BINDING DOMAIN, CRAL/TRIO DOMAIN-CONTAINING PROTEIN-RELATED 1 300 - -
Sto9g3006 302 Gene3D - 2 277 IPR036865 -
Sto9g3006 302 PANTHER GH16843P 1 300 - -
Sto9g3006 302 SUPERFAMILY CRAL/TRIO domain 84 263 IPR036865 -
Sto9g3006 302 Pfam CRAL/TRIO, N-terminal domain 36 68 IPR011074 -
Sto9g3006 302 Pfam CRAL/TRIO domain 93 241 IPR001251 -
Sto9g3006 302 MobiDBLite consensus disorder prediction 264 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3006 Sto-Chr9 31062271 31064607 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3006 51 215 Acyl Lipid Metabolism Gene Families AT1G55840 25.000 4.21e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3006 - - gmx:100780151 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3006 9 31062271 31064607 Sto9g3006 9 31062271 31064607 ECH