Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3001 ATGGCAAACCATATCAGCCTAAGGATATGGCTCTTCAACCTATTTCTCATTGGCGCTGCTTTGCTTCCTATTTCTCACAGTTCACCATCACATTACGGCTTTCAATCTAAAGCTAAAGCTAAACCACTTACTACTCAATCTGACTTTAAAGTTAGAGGAGCAAATCTAGGTGGTTGGCTGGTCATTGAAGGTTGGATTCATCCTTCCAACTTCGATGGCATTCCAAACGGGGATTTCTTGGATGGAACGACTCTTCAATTAAAGTCCGTGACAACTAAAAAATATCTTTGCGCGGATGCTGGGGGAGGAGATTATGTAGCAGCAAGTTGCGATGACAAATGTGGTTGGGAAAAATTTCGATTGTGGCGAATAAACGAAAACACTTTTCAAATCAGGGTACCCAAGGACCAATTTTTGGGTATCGATGGAACTCAGGTTGTTGCTGTGGTTGTTGATCCTACCGATGAAGAGAATTTTGAAATCATTAGGGGAAGTAAAGATCCTAATCGTGTTCGAATCAAAGCATCCAATGGATATTACTTACAGGCGAAGTCAGAGAAAGAAGTGATGGCAGATGGTCCAAAAGATAGTGACTGGGGAGACAATGATCCTACTGTTTTTGAATTGACGATTCTTTCACAAATAAATGGCGATTGGCAACTCCAGAATGGGTGGGGTCCTAAAGCTGCTCAAGTTATGCAGAATCACTATGATACTTTCATTGTGGAAGATGATTTTAAGTTCATGTCCGAAAATGGAATTAATGCTGTAAGAATACCAGTTGGTTGGTGGACTATTTATGATCCAAATCCTCCTTTCCCATTCGTAAGCGGTACTTTGAAAGCACTCGACAATGCCTTCTCATGGGCCAAgAAATATGGATTGAAAGTTATACTTGATCTTCATTCAGCACCAGGTTCACAAAATGGTGTTGCACACAGCACTACAAGAGATGGCTCTTTAGAATGGGGAAAAACAAATGAGACCATCCAACAAACACTTGAAGTCATAGACTTCTATGCTGCAAGGTATGCAAAACATGAAAACTTGTATGGATTTGAACTCTTAAATGAACCTCTATATCCTTATGTTTCCTTGAAGACTGTGGAAGAGTATTATCGACTTGCTTATAAAGTTGTACGCCATTACAACCCTACAGTTTACGTGATATTTGCCACTAGGCTAAGTTTTACTCGGGACGACGTGCCTTCGTATCTAGAACTCTCTCCTCTTGTCAATAGCTTTGAGAATAGTGTGCTTGTTATCAATTGGTACAGTCTTTTCTATGACACATTTACTAATTTCACTGCCAAAGATCATATTGAGTACGTCAAAGTCGAGCGCAATAGACAAATGACAAAGCTTCTAGAAAACAATCAACAAGCtcgtatatatattgGAGAATGGTCTTGTGGATGGGATGCAGAGAACCCTACGGAAGAGGACCTCAAAGAATTTGCCAAGGCCAAAATGGAAGTATATGATCGAGCAACTTTTGGATGGACTTTTTGGACCTTTAAGAACGTCCAAAACAATTGGAGTATGAAGTGGTTGATTGAAAATGGATATATTGATCTCCTTCATCGTTAG 1590 0.3969 MANHISLRIWLFNLFLIGAALLPISHSSPSHYGFQSKAKAKPLTTQSDFKVRGANLGGWLVIEGWIHPSNFDGIPNGDFLDGTTLQLKSVTTKKYLCADAGGGDYVAASCDDKCGWEKFRLWRINENTFQIRVPKDQFLGIDGTQVVAVVVDPTDEENFEIIRGSKDPNRVRIKASNGYYLQAKSEKEVMADGPKDSDWGDNDPTVFELTILSQINGDWQLQNGWGPKAAQVMQNHYDTFIVEDDFKFMSENGINAVRIPVGWWTIYDPNPPFPFVSGTLKALDNAFSWAKKYGLKVILDLHSAPGSQNGVAHSTTRDGSLEWGKTNETIQQTLEVIDFYAARYAKHENLYGFELLNEPLYPYVSLKTVEEYYRLAYKVVRHYNPTVYVIFATRLSFTRDDVPSYLELSPLVNSFENSVLVINWYSLFYDTFTNFTAKDHIEYVKVERNRQMTKLLENNQQARIYIGEWSCGWDAENPTEEDLKEFAKAKMEVYDRATFGWTFWTFKNVQNNWSMKWLIENGYIDLLHR 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3001 529 Gene3D Glycosidases 204 528 - -
Sto9g3001 529 SUPERFAMILY (Trans)glycosidases 49 525 IPR017853 -
Sto9g3001 529 SUPERFAMILY Actin-crosslinking proteins 83 199 IPR008999 -
Sto9g3001 529 Gene3D - 62 201 - -
Sto9g3001 529 PANTHER FASCIN 38 526 IPR010431 GO:0007015|GO:0051015
Sto9g3001 529 Pfam Cellulase (glycosyl hydrolase family 5) 238 508 IPR001547 GO:0004553|GO:0071704
Sto9g3001 529 PANTHER CELLULASE CONTAINING PROTEIN, EXPRESSED 38 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3001 Sto-Chr9 30974411 30977113 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3001 - - gmx:100790619 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3001 9 30974411 30977113 Sto9g3001 9 30974411 30977113 ECH