Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2955 ATGCATCCTTTTTGCTGCGTCTCTGCCGTTTCTGATCAGTCTTCCCCAGTCAAACCCTCCCCTCCTCCCTTTTCCAACTTCAATATGCCTCCTCTTCCCCCCGCCGCCTCTTCCCCTGCCATTCGATCCGATTCGATTCCCCGTCCCAataaccaccaccaccaccactctcAAAGCAATCACAGCTTCACCGACTATGGACGACTCAGTCAGCGAGAGCAGCAGCAACCAGTGGTAGACGTCAAGATCAATGACTTAGTTGGGAATGGAATCTCCGGGATTCTGTACAAGTGGGTTAATTACGGCAAAGGCTGGAGACCTCGATGGTTTGTCCTTCAAGATGGTGTCCTTTCGTATTATAAGATTCACGGGCCCGATAGGATCATCGTCAATCAGGAAACCGAGAAGGGGTCCAAGGTTATTGGCGAAGAATCCATGCGAAGGATCTCTCGCAATACAAATTCTCATCACCACCACTTCAACCAACGACGAAAGCCGTTTGGGGAAATTCATCTCAAGGTTTCGACTATTCGCGAAAGCAGATCAGACGATAAACGCTTTTCCATTTTCACTGGAACAAAGAGACTCCACTTGAGGGCCGAGACACGTGAAGATAGAGTGGCATGGGTGGAGGCATTGCAGGCAGTAAAAGATATGTTCCCCCGAATGTCCAACAGTGAGCTGATGGCTCCATTAGACTATCTAACAATTTCAACTGAAAAGCTGAGACAAAGGCTTCTGGAAGAAGGTGTAAGTGAGGCCGCCATTCAAGACAGTGAGCAAATTATGAGAAGTGAATTTGCAGCGCTACAGAACCAGCTCGTGCTGCTGAAGCAGAAGCAGTTGCTCCTGATAGACACATTACGATTGCTAGAGACAGAAAAGGTCGACCTGGAGAATACAGTTGTTGATGAGAGCCAAAGACAGTGGAATGATCAAGAGGCTGCCACCAGATTGAGGCAGGAAAAATTTAGTGGTAAGTTTTTGTATGATGTCCTGTTTAGTATCAATAAGGTGTCGTCTTTCTCCTCGGATGAAGGGATGTATGCGATTGAATCAGAGGAGGATCTAGATCCTTCAATTAGAAGTGTTGGAACCAGCTATCCTTATGTCAAGAGGCGTAAGAAATTGCCTGACCCTATTGAAAAAGAGAAAGGTGTCAGTCTTTGGTCGATGATTAAGGATAATATTGGAAAGGATCTAACAAAAGTATGTCTTCCTGTTTATTTCAATGAGCCTCTCTCCTCTCTGCAAAAATGTTATGAAGAAATGGAGTACTCATATCTCTTGGATCGGGCATATGAATGGGGAAGAAGGGGTAATAGCCTCATGAGGATTCTCAACGTGGCTGCTTTTGCTGTATCTGGCTATGCTTCAACTGAAGGAAGAATTTGCAAACCATTTAATCCATTATTAGGGGAAACGTATGAGGCTGATTATCCAGATAAAGGCCTTCGTTTCTTCTCAGAGAAGgTCAGTCATCACCCGATGATAGTTGCATGTCACTGTCAGGGTACaggttggaaattttggggaGACAGCAACTTAAAGAGCAAATTTTGGGGTCGATCAATTCAGCTTGACCCTGTTGGCATTTTGACTTTGGAATTTGATGATGGGGAAGTTTTTCAGTGGAGTAAGGTCACAACATCAATATACAACCTCATATTGGGGAAGCTGTACTGTGATCACTATGGTACAATGCGCATACAAGGAAACAGAGATTACTCTTGTAAACTGAAATTCAAGGAGCAATCTATAATTGATCGAAACCCTCATCAGGTACATGGTATAGTTCAAGATAAGAATGGAAAAACAGTGGCAACTCTTTTTGGAAAATGGGATGAAAGCATGCATTATGTTAGTGGAGACTGTGCTGGGAAGGGAAAAGGTTATGACTCTTTGTCAGAAGCCCAAGTACTGTGGAAGCGGAGCAAACCTCCGAAGTTTCCCACTAGATATAATTTCACTCGCTTTGCCATTACATTAAATGAACTTACCCCTGGATTGAAGGAAAAGTTGCCACCTACGGATTCCAGGTTAAGACCCGACCAGAGGTATTTGGAAAATGGGGAGTATGAGATGGCCAATTCAGAGAAGTTACGGCTAGAGCAGCGGCAGCGCCAGGCTAGGAAGATGCAAGAGAGCGGTTGGAAACCACAGTGGTTCAGCTTAGATAAAGCAAGCGGGACATACCGCTATTTGGGAGGGTATTGGGAGGCCAGGGAACGAGGAAATTGGAACTCTTGCCCTGACATTTTTGGCCACATCCCTTCTGATCATCTTTTTGATTGA 2295 0.4405 MHPFCCVSAVSDQSSPVKPSPPPFSNFNMPPLPPAASSPAIRSDSIPRPNNHHHHHSQSNHSFTDYGRLSQREQQQPVVDVKINDLVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDRIIVNQETEKGSKVIGEESMRRISRNTNSHHHHFNQRRKPFGEIHLKVSTIRESRSDDKRFSIFTGTKRLHLRAETREDRVAWVEALQAVKDMFPRMSNSELMAPLDYLTISTEKLRQRLLEEGVSEAAIQDSEQIMRSEFAALQNQLVLLKQKQLLLIDTLRLLETEKVDLENTVVDESQRQWNDQEAATRLRQEKFSGKFLYDVLFSINKVSSFSSDEGMYAIESEEDLDPSIRSVGTSYPYVKRRKKLPDPIEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCYEEMEYSYLLDRAYEWGRRGNSLMRILNVAAFAVSGYASTEGRICKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMIVACHCQGTGWKFWGDSNLKSKFWGRSIQLDPVGILTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNRDYSCKLKFKEQSIIDRNPHQVHGIVQDKNGKTVATLFGKWDESMHYVSGDCAGKGKGYDSLSEAQVLWKRSKPPKFPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEYEMANSEKLRLEQRQRQARKMQESGWKPQWFSLDKASGTYRYLGGYWEARERGNWNSCPDIFGHIPSDHLFD 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2955 764 MobiDBLite consensus disorder prediction 16 37 - -
Sto9g2955 764 Gene3D - 474 649 - -
Sto9g2955 764 Coils Coil 693 713 - -
Sto9g2955 764 MobiDBLite consensus disorder prediction 11 74 - -
Sto9g2955 764 Gene3D - 685 745 - -
Sto9g2955 764 CDD PH_ORP_plant 91 225 - -
Sto9g2955 764 Pfam Pleckstrin homology domain 96 214 - -
Sto9g2955 764 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 2 325 - -
Sto9g2955 764 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 338 758 - -
Sto9g2955 764 Pfam Oxysterol-binding protein 388 743 IPR000648 GO:0008289
Sto9g2955 764 ProSiteProfiles PH domain profile. 88 218 IPR001849 -
Sto9g2955 764 SMART PH_update 89 220 IPR001849 -
Sto9g2955 764 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 338 758 IPR000648 GO:0008289
Sto9g2955 764 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 325 IPR000648 GO:0008289
Sto9g2955 764 Gene3D - 89 220 IPR011993 -
Sto9g2955 764 SUPERFAMILY Oxysterol-binding protein-like 383 759 IPR037239 -
Sto9g2955 764 Coils Coil 288 308 - -
Sto9g2955 764 SUPERFAMILY PH domain-like 91 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2955 Sto-Chr9 30683403 30689213 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2955 K20456 - gmx:100137077 1237.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2955 9 30683403 30689213 Sto9g2955 9 30683403 30689213 ECH