Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2954 ATGCCGTCACTGCTCTTCCACTCTGTGCGGATTCCTGCGTTGACTTCGTCACTCTTCTTGTTACCAAAAGTAAGATTAGCAAACACCAGGCTCTGTAATCTCTCTGCGTTAATGGCGTCTTCAGCTGTGGGCATCAATTCTCCCAGTTCGCTGGTTCTATGCGGGAAGTCGCCGACAGAGAATGAAATTGCGAAATCTATTAAGAGCAACAACACTTTGAAGCTTCCCGACGATGGCGAAACTTCGATTAGTTTGCAGTCGGAATTGGATAATAAAGCTTTTAAAGAAGGCTCCTTCGGAATTGATTCATTCATGAATTCTCTTACCACTGATAAGTTTGGCAGGTTTCTCATTTGGTCCCCTCGCTTGTCTTCAACGCATGATGTCGTTTCACACAACTTTTGTGAGCTTCCTATTGGAACCGTATGTGTTGCTGATGTTCAGACCAAGGGACGAGGCCGGTCAAAGAATGTGTGGGAGTCTCCATTGGGATGTCTCCtattttctttcactctacaaatGGAGGATGGGCGAGTTGTTCCTTTAGTACAATATGTAGTTTCTCTGGCTATCACGGAGGCAGTGAAGGATATCTGTGACAGTAACGGCTTACCCAGCGTTGATGTAAAAATTAAGTGGCCAAATGATCTTTACTTAAATGGCCTTAAGGTTGGAGGCATTCTATGCACCTCAACCTATAAATCAAAGAAGTTTAATGTCAGTGCAGGTATAGGTTTGAATGTGAACAATGAGAAGCCAACAACATGCCTAGATACAGGTCTAAGAGGATTGTCTGTGGAAGCTTACCAATTTCAGAGAGAAGACATTCTGGCGGCCTTCTTTAAcaaatttgagaaattttatAATCTATTTGTGAATGAAGGATTTCAAACCCTAGAGCAGCTATATTATAAGACATGGTTGCACAGTGGACAGAGAGTTATTGTACAGGAGAAGAAGAATGAGGACAAAGTGATTGAACACGTGGTAACCATTCAGGGTTTGACATCCACTGGTTACTTGTTGGCCGTTGGTGATGACAATCAAATGTATGAGCTCCATCCTGATGGAAACAGCTTTGATTTTTTCAAAGGACTGGTTAGAAGAAAACTCGAGTGA 1119 0.4164 MPSLLFHSVRIPALTSSLFLLPKVRLANTRLCNLSALMASSAVGINSPSSLVLCGKSPTENEIAKSIKSNNTLKLPDDGETSISLQSELDNKAFKEGSFGIDSFMNSLTTDKFGRFLIWSPRLSSTHDVVSHNFCELPIGTVCVADVQTKGRGRSKNVWESPLGCLLFSFTLQMEDGRVVPLVQYVVSLAITEAVKDICDSNGLPSVDVKIKWPNDLYLNGLKVGGILCTSTYKSKKFNVSAGIGLNVNNEKPTTCLDTGLRGLSVEAYQFQREDILAAFFNKFEKFYNLFVNEGFQTLEQLYYKTWLHSGQRVIVQEKKNEDKVIEHVVTIQGLTSTGYLLAVGDDNQMYELHPDGNSFDFFKGLVRRKLE 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2954 372 Pfam Biotin protein ligase C terminal domain 309 365 IPR003142 GO:0036211
Sto9g2954 372 Gene3D Bira Bifunctional Protein; Domain 2 105 306 IPR045864 -
Sto9g2954 372 ProSiteProfiles Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) catalytic domain profile. 102 292 IPR004143 GO:0036211
Sto9g2954 372 SUPERFAMILY Class II aaRS and biotin synthetases 104 307 IPR045864 -
Sto9g2954 372 TIGRFAM birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 120 342 IPR004408 GO:0004077|GO:0036211
Sto9g2954 372 CDD BPL 116 291 IPR004408 GO:0004077|GO:0036211
Sto9g2954 372 Pfam Biotin/lipoate A/B protein ligase family 120 247 IPR004143 GO:0036211
Sto9g2954 372 PANTHER HOLOCARBOXYLASE SYNTHETASE (BIOTIN-(PROPRIONYL-COA-CARBOXYLASE (ATP-HYDROLYSING)) LIGASE) 49 370 - -
Sto9g2954 372 PANTHER BIOTIN PROTEIN LIGASE 49 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2954 Sto-Chr9 30666434 30670094 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2954 K01942 - gmx:100818402 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2954 9 30666434 30670094 Sto9g2954 9 30666434 30670094 ECH