Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2950 ATGGCGTTACATCTTCAAATCTTTATAATTCTAGTAATCATTTCAATTTCAGGATGCGAGTCAGCCAGAGTTTTCACCATTATAAATAACTGCAAGGAGACGGTGTGGCCCGCAGTGACACCAGGGGACAACTTCGACGGCGGAGGCTTCGTTCTAAAACCACGTCAATCCAAAGTGTTCACAGCCCCGGTCGGGTGGGTGGGCCGAATTTGGGCCCGAACCGGATGCAACTTCGACTCAAACGGAAACGGGTCGTGCCAAACCGGAGCGTGCGGGTCGTCCTTGAAATGCTCAGCTTCAGGAAAGCCCCCTGCTTCACTCGCGGAATTTACGCTGGCGGCGGTGGATTACTACGACGTTAGCCTCGTGGACGGCTACAACGTAGCGGTGGTGGTTACGCCGATCAACGGAAAAGGTAATTGCTCGACGGTTGGGTGTGATTCGGACGTGAAACCGAAATGTCCGTCGGAGTTAGCGGTGAAGGCGAAGGGAAAAGTGATAGCGTGCCGGAGCGCGTGCGATGTGTTTGACACGGATGAGTATTGCTGCAGAGGGGTATATGGGAACCCTGTGACCTGCAAACCCACCTATTACTCCAAGCAGTTCAAGGAAGCCTGCCCTAATGCTTATAGTTATGCCTATGATGATCCTACTAGTATTTTCACTTGTGCTGCCACTGACTATGCCATTGCCTTTTGCTCTTCCAGGAAGCAACCAGTGTGCACCTACCATGACAAGAAGTTGCATTGCAGTGGATCCAAAGGCCTCAACTCATTGATTGGAAGCAGCTGGCTGATGGTGATGCTCCTCATGTTTTCTTCCTGGAATCTATTCTAG 837 0.5114 MALHLQIFIILVIISISGCESARVFTIINNCKETVWPAVTPGDNFDGGGFVLKPRQSKVFTAPVGWVGRIWARTGCNFDSNGNGSCQTGACGSSLKCSASGKPPASLAEFTLAAVDYYDVSLVDGYNVAVVVTPINGKGNCSTVGCDSDVKPKCPSELAVKAKGKVIACRSACDVFDTDEYCCRGVYGNPVTCKPTYYSKQFKEACPNAYSYAYDDPTSIFTCAATDYAIAFCSSRKQPVCTYHDKKLHCSGSKGLNSLIGSSWLMVMLLMFSSWNLF 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2950 278 CDD TLP-PA 24 233 - -
Sto9g2950 278 ProSiteProfiles Thaumatin family profile. 22 233 IPR001938 -
Sto9g2950 278 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 6 247 - -
Sto9g2950 278 PRINTS Pathogenesis-related protein signature 24 36 IPR001938 -
Sto9g2950 278 PRINTS Pathogenesis-related protein signature 48 57 IPR001938 -
Sto9g2950 278 PRINTS Pathogenesis-related protein signature 69 80 IPR001938 -
Sto9g2950 278 PRINTS Pathogenesis-related protein signature 82 111 IPR001938 -
Sto9g2950 278 PRINTS Pathogenesis-related protein signature 116 132 IPR001938 -
Sto9g2950 278 PRINTS Pathogenesis-related protein signature 224 233 IPR001938 -
Sto9g2950 278 PANTHER OS03G0233200 PROTEIN 6 247 IPR001938 -
Sto9g2950 278 PIRSF PR5 1 274 IPR001938 -
Sto9g2950 278 Gene3D Thaumatin 24 233 IPR037176 -
Sto9g2950 278 SUPERFAMILY Osmotin, thaumatin-like protein 24 234 IPR037176 -
Sto9g2950 278 Pfam Thaumatin family 29 233 IPR001938 -
Sto9g2950 278 SMART tha2 25 234 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2950 Sto-Chr9 30642548 30643498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2950 7 239 Receptor kinase-like Gene Family AT5G38280 45.817 1.87e-57 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2950 - - zju:107421016 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2950 9 30642548 30643498 Sto9g2950 9 30642548 30643498 ECH