Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2949 ATGGCTTCTGAGAAGGTTGAGACTGTGGTTGCAGGAAACTATCTAGAAATGGAAAGAGAGGATGCAGATTCTAAATCAGCTAAAAGCAAGCTATCTCAGTTCTTGTGGCATGGTGGATCAGTCTATGATGCATGGTTTAGCTGTGCTTCTAATCAGGCACTTACTCATAAATTAATGCAGGTTGCACAAGTGCTACTTACATTGCCATATTCCTTTTCACAACTGGGGATGCTATCTGGGATTCTGTTTCAGCTTTTTTATGGGTTGATGGGAAGCTGGACTGCTTACCTTATAAGTGTCCTTTATGTTGAGTACAGAACCAggaaggagagagagaaggTTGATTTCAGGAACCATGTGATTCAGTGGTTTGAAGTTCTTGATGGACTCCTAGGCAAACATTGGAGAAATATAGGCCTCTTTTTCAACTGTACCTTCCTTCTGTTTGGATCAGTGATTCAACTTATTGCCTGTGCAAGTAACATATACTACATAAACGACAATCTTGACAAAAGAACCTGGACTTACATCTTTGGCGCCTGCTGTGCCACAACAGTGTTCATCCCTTCTTTCCATAATTACAGAATTTGGTCATTCTTGGGCCTCATCATGACCACTTACACTGCATGGTATCTTACCATAGCTTCCTTTCTCCACGGACAGGTTGAGGGGGTCAAACACTCAGGCCCAACCAAATTGGTTCTCTACTTCACTGGGGCCACCAACATTCTCTACACCTTCGGTGGACATGCTGTCACAGTGGAAATTATGCATGCAATGTGGAAGCCACAAAAGTTCAAGATGATATATCTGTTGGCAACACTGTATGTGCTGACTTTAACTCTACCATCAGCATCTGCAGTGTACTGGGCATTTGGGGACATGCTCCTTACTCATTCCAATGCCCTCTCTTTGTTCCCAAGGACAGGCTTTAGGGACACTGCTATCATTCTCATGCTAATTCACCAGTTCATAACATTTGGATTTGCTTGTACTCCTCTGTACTTTGTGTGGGAGAAATTCATTGGTGTGCATGAAACAAAGAGCTTGTTCAAAAGGGCTTTGGCTAGACTTCCTGTGGTGATTCCAATATGGTTTCTTGCAATCATATTCCCTTTCTTTGGGCCCATCAACTCAACTGTTGGATCTCTCTTGGTCAGCTTCACAGTTTACATAATTCCTGCCATGGCACACATGGTCACCTTTGCTTCAGCCCCAGCCAGGGAGAATGCTGTGGAGAGACCACCATCATTTCTTGGAGGTTGGGTAGGACTGTACTCCATGAACGTATTTGTGGTGGTGTGGGTTTTGGTGGTAGGATTTGGGTTGGGAGGATGGGCAAGCATGCTAAATTTCATACAGCAAGTTAACACATTTGGGCTATTTGCCAAGTGCTATCAGTGTCCTCCTCACAAAGCATAA 1422 0.4311 MASEKVETVVAGNYLEMEREDADSKSAKSKLSQFLWHGGSVYDAWFSCASNQALTHKLMQVAQVLLTLPYSFSQLGMLSGILFQLFYGLMGSWTAYLISVLYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLIMTTYTAWYLTIASFLHGQVEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKMIYLLATLYVLTLTLPSASAVYWAFGDMLLTHSNALSLFPRTGFRDTAIILMLIHQFITFGFACTPLYFVWEKFIGVHETKSLFKRALARLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPAMAHMVTFASAPARENAVERPPSFLGGWVGLYSMNVFVVVWVLVVGFGLGGWASMLNFIQQVNTFGLFAKCYQCPPHKA 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2949 473 PANTHER OS05G0424000 PROTEIN-RELATED 3 468 - -
Sto9g2949 473 Pfam Transmembrane amino acid transporter protein 60 438 IPR013057 -
Sto9g2949 473 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 3 3 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2949 Sto-Chr9 30636748 30638876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2949 1 472 Organic Solute Cotransporters AT1G77690 85.744 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2949 K13946 - tcc:18592286 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2949 9 30636748 30638876 Sto9g2949 9 30636748 30638876 ECH