Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2906 ATGAGAAATCGGaaatcttcctcttcctcctcctcctcctccgccATCATATTCTTATTAATCCTTCTTACTCTTACAAACTCTACAATCTCATTCGCCGATTCCGCTCTCTCCATCTTCTCCGCCGACCGGAGATGTTACGGTGTGGAGACCAAACCGAACGGCTTGGCCTCGTCTTGTAAGAACCAGACGCTGCGACGAACGGCGGCGATATCGGAGTGTGATGTAGTATGGACGAAGGCGTGCTCGGAGGCGGTGCTGAGCATAGCGCGGCGGCCGGAGATGGCGGAGTGGTTGAGGAAGGTGAGGAGACGGATCCACGAGAATCCGGAACTGGCTTTTGAGGAAATCGAGACGAGCCGTTTGATTCGAGAGGAGTTGGATCTGATGGAAGTTAGTTATCGATACCCGCTCGCCAAGACCGGTATCAGAGCGTGGATTGGCACTGGGGGACCGCCTTTTGTTGCCATCAGAGCTGACATGGACGCCCTCCCTATTCAGGAAGCTGTAGAATGGGAGTACAAATCTAAAGTTGCTGGCAAAATGCATGCTTGTGGGCACGATGCACATGTGGCCATGCTTATTGGTGCTGCCAAAATCCTTAAGAGTCGCGAGCATCTATTGAAGGGAACTGTAATACTGATATTCCAGCCAGCAGAAGAAGCTGGGAATGGAGCAAAGCGAATGATAGAAGAGGGTGCTTTGGAGGATGTGGAGGCTATATTTGCAGCTCATGTATCTCATGAACATCCAACTGCTATTATTGGGTCAAGGCCTGGACCTGTGCTTGCTGGCTGTGGTTTTTTCAGAGCCGTGATTAGTGGCAAAATGGCTCGCACTTCCACCCCACACCACTCTCTTGACCCTCTTTTGGCTGCTTCTGCTGCTGTCATCAGCTTACAGGGCATTGTCTCTCGCGAATCAAACCCATTAGACTCGCAGGTTGTCTCTGTCACTTCATTCAATGGAGGCCACAATCTTGACATGATTCCAGACACAGTCATTCTCGGTGGTACTTTCAGAGCTTTCTCGAATGCAAACTTCTACCAGCTTCGTCAAAGAATAGAGCAGGTGATTGTGGAGCAAGCTAGCGTGTATAGATGCTGGGGAGAAGTAGACTTCTTTGAGAAGGAGTACACCACTTATCCTCCCACGGTTAACGCGGACAGAATGTATGAGCATGTGAAGAAGACGGCCATGGATTTGTTGGGTGAAAATAATTTCAGATTAGTCCCTCCTATGATGGGATCTGAAGATTTCTCATTTTATTCCGAGGTGGTTCCCTCAGCTTTCTTCTACATTGGGATAAGGAACGAGACATTGGGGTCCACTCATACAGGACACTCTCCTCTTTTCATGATTGATGAAGATGTTCTTCCCATAGGTGCTGCCACTCATGCCTCCATCGCTGAGAGGTATCTCATTGAACACGGCTGA 1437 0.4809 MRNRKSSSSSSSSSAIIFLLILLTLTNSTISFADSALSIFSADRRCYGVETKPNGLASSCKNQTLRRTAAISECDVVWTKACSEAVLSIARRPEMAEWLRKVRRRIHENPELAFEEIETSRLIREELDLMEVSYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMIEEGALEDVEAIFAAHVSHEHPTAIIGSRPGPVLAGCGFFRAVISGKMARTSTPHHSLDPLLAASAAVISLQGIVSRESNPLDSQVVSVTSFNGGHNLDMIPDTVILGGTFRAFSNANFYQLRQRIEQVIVEQASVYRCWGEVDFFEKEYTTYPPTVNADRMYEHVKKTAMDLLGENNFRLVPPMMGSEDFSFYSEVVPSAFFYIGIRNETLGSTHTGHSPLFMIDEDVLPIGAATHASIAERYLIEHG 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2906 478 CDD M20_IAA_Hyd 99 474 IPR044757 GO:0009850|GO:0016787
Sto9g2906 478 SUPERFAMILY Zn-dependent exopeptidases 93 476 - -
Sto9g2906 478 SUPERFAMILY Bacterial exopeptidase dimerisation domain 264 383 IPR036264 -
Sto9g2906 478 Pfam Peptidase family M20/M25/M40 156 471 IPR002933 GO:0016787
Sto9g2906 478 Gene3D Zn peptidases 101 467 - -
Sto9g2906 478 Pfam Peptidase dimerisation domain 269 363 IPR011650 -
Sto9g2906 478 Gene3D - 264 383 - -
Sto9g2906 478 TIGRFAM amidohydrolases: amidohydrolase 100 462 IPR017439 GO:0016787
Sto9g2906 478 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 63 477 - -
Sto9g2906 478 PANTHER PEPTIDASE M20 FAMILY MEMBER 63 477 IPR017439 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2906 Sto-Chr9 30340637 30345241 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2906 K21604 - gmx:100785666 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2906 9 30340637 30345241 Sto9g2906 9 30340637 30345241 ECH