Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2897 atgcatgtcaaaagcAACCAAATCGCATTGACGGTCTTATTTTTTCTggccttctcttctcttttcccTCTGTCTTTCTCAGCCGCCAATCAACCCCGCAACTCTAAAAAGTCCACCCACCCAACTTCTGCTAATCGCTTTGCTTCCTCTATTGTTTTCCCCGTTCAAGGGAATGTATATCCTCTTGGGTATTACACAGTGTCCCTTAACATAGGCTATCCACCAAAGCTTTACGACCTTGATATTGACTCCGGTAGTGACCTCACTTGGGTACAATGTGACGCCCCATGTCGAGGTTGCACCAAGCCTCGTGATCAACTATATAAACCCAACAACAATGTTGTACAATGTGTGGACCAGTTGTGTGCTCCGGTTCGCTTATCCACAAATCACCATTGTTCTGGTCCAGATGAGCAATGCGACTACGAGGTTGAGTATGCAGACAATGGATCATCTCTTGGTGTGCTTGTTAAAGACTACATTCCCCTTCAGTTCACCAATGGCTCTGTCCTGCGTCCTAGGATCGCCTTTGGGTGTGGATATGATCAGAAGTTCTCTGGTCCAACCTCTCCACCTTCTACAGCAGGAGTTCTTGGCCTTGGAAGAGGAAAGGCAAGCATTTTGTCACAGCTTCATTCTCTGGGTCTGACTAGCAATGTGGTGGGACACTGCTTAAGTGGTAGAGGAGGAGGGTTTTTATTCTTTGGAGATGATCTCAACCCTTCATCTGGAAATGTTTGGACACCTATACTACCTAGTTCCTCCGAAAAACACTACAGCTTAGGACCAGCTGAACTGCTTTTCAATGCAAAGCCTACAACGGTTCAGGGTCTTGAAGTTATATTTGACAGTGGAAGCTCCTACACATACTTCAATTCCAAAGCTTATCAAGCAATTGTTGATCTGGTAATCAATGACTTGAAGGGAAAGAAGTTGACAAGAGCAACTGAAGATCCATCACTTCCAATTTGCTGGAAGGGTGCGAAACCTTTCAAATCTTTGCGTGATGTCAATAGCTATTTCAAGCCATTGGCTCTGAGCTTCACGAAAACAAGAAATGTGCTTCTGCAACTACCACCAGAAGCTTATCTAATTGTCACGAAACATGGCAATGTGTGTCTGGGGATCCTAAATGGCGATGAAGTAGGACTGGAGGATCTTAATATAATTGGAGACATCTCTTTACAAGATAAAATGGTGATTTACGACAATGAGAAACAGCTGATCGGATGGGTTTCTGCCAATTGTGATAGGCTTCCCAAGTCGTAA 1269 0.4303 MHVKSNQIALTVLFFLAFSSLFPLSFSAANQPRNSKKSTHPTSANRFASSIVFPVQGNVYPLGYYTVSLNIGYPPKLYDLDIDSGSDLTWVQCDAPCRGCTKPRDQLYKPNNNVVQCVDQLCAPVRLSTNHHCSGPDEQCDYEVEYADNGSSLGVLVKDYIPLQFTNGSVLRPRIAFGCGYDQKFSGPTSPPSTAGVLGLGRGKASILSQLHSLGLTSNVVGHCLSGRGGGFLFFGDDLNPSSGNVWTPILPSSSEKHYSLGPAELLFNAKPTTVQGLEVIFDSGSSYTYFNSKAYQAIVDLVINDLKGKKLTRATEDPSLPICWKGAKPFKSLRDVNSYFKPLALSFTKTRNVLLQLPPEAYLIVTKHGNVCLGILNGDEVGLEDLNIIGDISLQDKMVIYDNEKQLIGWVSANCDRLPKS 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2897 422 Gene3D Acid Proteases 39 237 IPR021109 -
Sto9g2897 422 ProSiteProfiles Peptidase family A1 domain profile. 65 412 IPR033121 -
Sto9g2897 422 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 2 419 - -
Sto9g2897 422 Pfam Xylanase inhibitor C-terminal 278 411 IPR032799 -
Sto9g2897 422 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 280 291 IPR001969 GO:0004190|GO:0006508
Sto9g2897 422 Pfam Xylanase inhibitor N-terminal 65 237 IPR032861 -
Sto9g2897 422 PANTHER ASPARTYL PROTEASES 2 419 IPR001461 GO:0004190|GO:0006508
Sto9g2897 422 PRINTS Pepsin (A1) aspartic protease family signature 71 91 IPR001461 GO:0004190|GO:0006508
Sto9g2897 422 PRINTS Pepsin (A1) aspartic protease family signature 280 291 IPR001461 GO:0004190|GO:0006508
Sto9g2897 422 PRINTS Pepsin (A1) aspartic protease family signature 388 403 IPR001461 GO:0004190|GO:0006508
Sto9g2897 422 Gene3D Acid Proteases 238 419 IPR021109 -
Sto9g2897 422 SUPERFAMILY Acid proteases 57 420 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2897 Sto-Chr9 30287871 30290379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2897 35 422 Miscellaneous Gene Families AT1G44130 60.154 1.24e-174 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2897 - - aprc:113846122 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2897 9 30287871 30290379 Sto9g2897 9 30287871 30290379 ECH