Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2890 ATGTCGATCTTCGAGTACAATGGAAGTGCCTTAGTGGCTATGGTGGGTAAGAACTGCTTCGCCATCGCCAGCGATCGGAGACTCGGTGTTCAGCTTCAGACTATCGCCACCGATTTTCAGAGAATTTCCAAGATTCATGATAAGCTTTTCATTGGTCTTTCTGGCCTCGCCACTGACGCCCAGACACTGTACGAAACGAATACTATCACCTCCGGCTATCAACGGCTCGTGTTCCGGCACAAATTATACCAGCTTCGGGAAGAGAGGGATATGAAGCCCGAGACGTTTGCCAGCTTAGTCTCCGCTATTCTATACGAGAAAAGGTTTGGTCCATACTTTTGCCAGCCTGTAATTGCTGGATTGGGAGATGAAGACAAACCCTTCATTTGCACAATGGATTCAATTGGAGCAAAGGAGCTTGCAAAAGATTTTGTTGTTGCTGGCACTGCGTCCGAGTCTCTCTATGGTGCTTGTGAGTCGATGTTTAAGCCTGACATGGAAGCAGATGAATTATTTGAGACCATCTCCCAAGCACTGCTTTCATCTGTAGATCGTGACTGTCTAAGTGGCTGGGGTGGACATGTCTATGTTGTCACGCCTACTGAAGTAAAGGAAAGGATCTTGAAGGGAAGAATGGATTAA 642 0.4688 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDAQTLYETNTITSGYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYFCQPVIAGLGDEDKPFICTMDSIGAKELAKDFVVAGTASESLYGACESMFKPDMEADELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2890 213 CDD proteasome_beta_type_3 6 209 IPR033811 GO:0019774|GO:0043161
Sto9g2890 213 Pfam Proteasome subunit 7 198 IPR001353 GO:0005839|GO:0051603
Sto9g2890 213 PANTHER PROTEASOME SUBUNIT BETA 4 207 - -
Sto9g2890 213 ProSiteProfiles Proteasome beta-type subunit profile. 8 198 IPR023333 -
Sto9g2890 213 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 4 207 - -
Sto9g2890 213 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 1 213 IPR029055 -
Sto9g2890 213 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 213 IPR029055 -
Sto9g2890 213 ProSitePatterns Proteasome beta-type subunits signature. 12 59 IPR016050 GO:0005839|GO:0051603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2890 K02735 - gmx:100306084 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2890 9 30234391 30238018 Sto9g2890 9 30234391 30238018 ECH