Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2889 CTGCTTCTGCTGCTCTTAACGGCGGCTTTCACCACCGCCCACGGAGGCAATGTCACCTACGACGGAAGGTCTTTAATCATCGACGGCCAACATAAAATCCTCTTCTCCGGTTCAATTCACTATCCTCGCAGCACTCCTGAGATGTGGCCTTCTTTAATCGCGACAGCCAAGAAGGGAGGAATAGACGTCATACAAACATACGTGTTTTGGAACCTTCATGAGCCTCAACAAGGCCAGTATGACTTCAGTGGGAGGCGAGATATAGTAAAGTTCATTGAAGAAATCCAAGCACAAGGTTTATATGTGACTCTCAGAATTGGACCTTTCATTGAAAGTGAATGGACTTATGGAGGTTTACCTCTTTGGTTACACGACATTCCAGGCATTGTTTTTAGATCAGATAACGAACCATTCAAGGTATTCACTATTCTTTCTCTTAGTTACTACAATAATTTCACTACCAAAATAGTAAACATGATGAAATCAGCTAATCTTTATGCTTCACAAGGAGGGCCCATCATACTCTCACAGATCGAGAACGAGTATAGTATGATTGAAGGGGCTTTTCACGAAAGAGGCCCACCTTATGTTCGTTGGGCTGCGCAAATGGCCGTGGGCCTTCAAACTGGTGTGCCATGGGCTATGTGCAAACAAGATGATGCTCCTGATCCTCTGATCAACACGTGCAATGGTATGGAGTGTGGGAAAACATTCAAGGGACCTAACTCGCCTAATAAGCCTTCTCTCTGGACAGAGAACTGGACAAGTTTCTATCAAGCATTTGGTGAAGAACCTTACTTGAGATCAGCTGAAGATATTGCATATAATGTTGCCTTGTTCATTGCAAAGAATGGAAGCTATGTTAATTACTATATGTACCATGGAGGAACCAATTTTGAAAGAACAGGTTCTGCTTTTGTGATAACTGCTTATTATGATCAAGCTCCACTAGATGAGTATGGTTTAATTAGGCAGCCAAAATGGGGCCATCTTAAGAAGCTACATGCTGCAATAAAGTCATGTTCAAATACTTTGCTTTCTGCAACCCAGACTACACTCAACTTGGGCACAAAACAAGAagcCTATGTATTCAGAAAAAGCTCAACAGAATGTGCTGCCTTTCTGGAAAATACAGATAATAAAGCAGTCACGATCAGATTTCAAAACATTCCCTATAGTTTGCCCCCAAAATCAATTAGTATTCTACCAAATTGCAAGAAAGTAGCTTTCAACACCGCAAAGGTGAGAACAAAATACAGCACCAGAACAATGAAATATGGGTTACAGTTTGGATCAAATGAACAATGGGAAGTGTACCAAGAAGCCATCCCCAAATTTGATGAAACTTCATTAAGAGCAAATAAGCTATTAGATCAGATTGGGACGGCAAAAGATACATCTGACTATCTGTGGTACACTTTCAGGTAA 1428 0.4118 LLLLLLTAAFTTAHGGNVTYDGRSLIIDGQHKILFSGSIHYPRSTPEMWPSLIATAKKGGIDVIQTYVFWNLHEPQQGQYDFSGRRDIVKFIEEIQAQGLYVTLRIGPFIESEWTYGGLPLWLHDIPGIVFRSDNEPFKVFTILSLSYYNNFTTKIVNMMKSANLYASQGGPIILSQIENEYSMIEGAFHERGPPYVRWAAQMAVGLQTGVPWAMCKQDDAPDPLINTCNGMECGKTFKGPNSPNKPSLWTENWTSFYQAFGEEPYLRSAEDIAYNVALFIAKNGSYVNYYMYHGGTNFERTGSAFVITAYYDQAPLDEYGLIRQPKWGHLKKLHAAIKSCSNTLLSATQTTLNLGTKQEAYVFRKSSTECAAFLENTDNKAVTIRFQNIPYSLPPKSISILPNCKKVAFNTAKVRTKYSTRTMKYGLQFGSNEQWEVYQEAIPKFDETSLRANKLLDQIGTAKDTSDYLWYTFR 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2889 475 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 170 182 IPR019801 GO:0004553|GO:0005975
Sto9g2889 475 Pfam Glycosyl hydrolases family 35 24 337 IPR031330 -
Sto9g2889 475 SUPERFAMILY (Trans)glycosidases 15 341 IPR017853 -
Sto9g2889 475 PANTHER BETA-GALACTOSIDASE RELATED 4 475 IPR001944 GO:0004553|GO:0005975
Sto9g2889 475 Pfam Beta-sandwich domain in beta galactosidase 345 415 IPR041392 -
Sto9g2889 475 PANTHER BETA-GALACTOSIDASE 4 475 - -
Sto9g2889 475 Gene3D Glycosidases 16 342 - -
Sto9g2889 475 PRINTS Glycosyl hydrolase family 35 signature 249 264 IPR001944 GO:0004553|GO:0005975
Sto9g2889 475 PRINTS Glycosyl hydrolase family 35 signature 49 67 IPR001944 GO:0004553|GO:0005975
Sto9g2889 475 PRINTS Glycosyl hydrolase family 35 signature 104 123 IPR001944 GO:0004553|GO:0005975
Sto9g2889 475 PRINTS Glycosyl hydrolase family 35 signature 28 45 IPR001944 GO:0004553|GO:0005975
Sto9g2889 475 PRINTS Glycosyl hydrolase family 35 signature 286 301 IPR001944 GO:0004553|GO:0005975
Sto9g2889 475 PRINTS Glycosyl hydrolase family 35 signature 305 321 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2889 Sto-Chr9 30228045 30231221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2889 1 473 Glycoside Hydrolase AT5G63800 65.690 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2889 - - gmx:100780980 783.482