Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2872 CTGACAGGAAGAGTTGAAGAGAAAAGGAGATGGTCTGAAGGAATACACCAGGCTGTAGAGGCAAAGGAGGGTTTAAAGATTCAGGCTGATTCAGTTGTTGTAGCTCAGATCACATACCAGTCATTATTTAAGCTCTATCCAAAGTTGTCAGGAATGACTGGAACTGCAAAAACTGAAGAGAAAGAGTTCTTAAAAATGTTTCAGATGCCAGTCATTGAAGTGCCCACAAATCTCCCAAACATTCGAAAAGATTTGCCTATTCAAGCTTTTGCTACTGCTCGTGGGAAATGGGAGCAAGTTCGTCGCGAAGTTGACTATATGTTTAGACAAGGTCGTCCTGTCTTAGTTGGGACAACTAGGTAA 363 0.4187 LTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRKDLPIQAFATARGKWEQVRREVDYMFRQGRPVLVGTTR 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2872 120 SUPERFAMILY Pre-protein crosslinking domain of SecA 2 29 IPR036670 GO:0016020|GO:0017038
Sto9g2872 120 Gene3D - 1 30 - -
Sto9g2872 120 Gene3D - 79 120 IPR027417 -
Sto9g2872 120 PANTHER PROTEIN TRANSLOCASE SUBUNIT SECA2, CHLOROPLASTIC 1 120 - -
Sto9g2872 120 PRINTS SecA protein signature 38 55 IPR000185 GO:0005524|GO:0006605|GO:0006886
Sto9g2872 120 PRINTS SecA protein signature 75 88 IPR000185 GO:0005524|GO:0006605|GO:0006886
Sto9g2872 120 PRINTS SecA protein signature 1 23 IPR000185 GO:0005524|GO:0006605|GO:0006886
Sto9g2872 120 ProSiteProfiles SecA family profile. 1 120 IPR014018 -
Sto9g2872 120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 77 IPR027417 -
Sto9g2872 120 Pfam SecA DEAD-like domain 9 63 IPR011115 GO:0005524|GO:0016020|GO:0017038
Sto9g2872 120 PANTHER SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM 1 120 IPR000185 GO:0005524|GO:0006605|GO:0006886
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2872 Sto-Chr9 30147884 30148559 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2872 K03070 - gmx:100793437 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2872 9 30147884 30148559 Sto9g2872 9 30147884 30148559 ECH