Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2871 ATGGCGATTCCCGTGATAGATTTCTCAAAGCTAAATGGGGAAGAAAGGGCCAAAACCATGGCAGAGATCGCAAATGGATGTGAAGAATGGGGATTTTTCCAGTTGATCAACCATGGCATTTCCGAGGAGCTGCTAGAGAGGGTGAAGAAGGTTTCCTCTGAGTGCTATAAACTGGAAAGAGAGGAAAACTTCAATAACTCAAAACCAATGAAGCTACTGAATGAAATAGTTGAAAAGAAGAGTGGTGAAAAGTTGGAGAATGCAGACTGGGAGGATGTCTTTATTCTCCAGGATGATAATGAATGGCCACAAAAAACACCAGGattcagGGAAACCATGGCAGAATATAGGTGTGAGTTAAAGAAACTAGCAGAGAAGGTAATGGAAGTGATGGATGAGAATTTGGGGTTGCCCAAAGGATACATCAAGAAGTCATTGAATGGTGGGGAAGGAGAAAATGCCTTCTTTGGTACCAAGGTGAGTCACTACCCACCTTGTCCCAATCCAGAGCTTGTGAATGGCCTGCGAGCTCACACTGATGCAGGTGGTGTTATCCTGCTCTTCCAAGATGATAAGGTGGGTGGTCTTCAAATGCTTAAGGATGGGCAATGGATTGATGTCCAACCCTTACCAAATGCCATTGTCATAAACACTGGTGATCAGATTGAGGTCCTCTCAAATGGTCGATACAAGAGTTGTTGGCATAGGGTTCTGGTCAGTACAGATAGGACCAGGAGATCAATTGCTTCCTTCTATAATCCATCACTTCAAGCCACCATAAGTCCTGCACCAGAATTGGTGGAAAAAGAAAACCAACAAGTGGCTTACCCAAGATTTGTTTTTCGTGACTACATGTCTGTCTATGCTGAGCAGAAGTTTCTTCCAAAGGAACCCAGGTTTCAAGCCGTCAGGGCCATATga 921 0.4376 MAIPVIDFSKLNGEERAKTMAEIANGCEEWGFFQLINHGISEELLERVKKVSSECYKLEREENFNNSKPMKLLNEIVEKKSGEKLENADWEDVFILQDDNEWPQKTPGFRETMAEYRCELKKLAEKVMEVMDENLGLPKGYIKKSLNGGEGENAFFGTKVSHYPPCPNPELVNGLRAHTDAGGVILLFQDDKVGGLQMLKDGQWIDVQPLPNAIVINTGDQIEVLSNGRYKSCWHRVLVSTDRTRRSIASFYNPSLQATISPAPELVEKENQQVAYPRFVFRDYMSVYAEQKFLPKEPRFQAVRAI 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2871 306 Coils Coil 41 61 - -
Sto9g2871 306 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 5-LIKE 2 304 - -
Sto9g2871 306 Pfam non-haem dioxygenase in morphine synthesis N-terminal 3 100 IPR026992 -
Sto9g2871 306 Pfam 2OG-Fe(II) oxygenase superfamily 161 254 IPR044861 -
Sto9g2871 306 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 2 304 - -
Sto9g2871 306 SUPERFAMILY Clavaminate synthase-like 1 299 - -
Sto9g2871 306 Gene3D - 2 306 IPR027443 -
Sto9g2871 306 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 154 254 IPR005123 -
Sto9g2871 306 Coils Coil 113 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2871 Sto-Chr9 30133879 30135121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2871 1 288 Glycosyltransferase AT5G59530 31.667 1.42e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2871 K05933 - gmx:100796909 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2871 9 30133879 30135121 Sto9g2871 9 30133879 30135121 ECH