Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2847 ATGGATTCGGTTTCAGGTTGGGAAAGAGGGAAAAGTAGTAATTTGGATGGATGGTGGGTTGAGAGTGAGAGAAAATTCAGGTGGCCTGAGGAGTACCTTGTGGAGGCGGAGGGAGAGGTGGAGGCCCCAATTGTGGACCTCGCTGGCTTCATTGCAGGCGATGAAGAAGCCACGCGCGCCGCCGCTGCGCTTGTAAGCCAAGCGTGCTTGAGCCACGGCTTCTTCCAAGTCATCAACCACGGCATTGATTCGGGGCTGATGGGTGAAGCCCTTCTCCACTCCGACGCTTTCTTTAAGCTGCCTCTTCACAGAAAACTAAGCGTCGGAGCCGGAACCGGAACCGGAACCAAGGGTGGGTCCTTGTGGGGCTATTCCGGCGCTCACACTCATCGCTTTTCCTCCAGACTCCCCTGGAAGGAGACCCTCTCTTTCcccttcccccacacttacACTAACTACTTTTCCTCTAACATTGGCCAAGATTTTGCACACGCAGGAGTGGTGTTCCACAAGTACTGCGAGGGGATGAAGGAGTTAGGGTTGAAGCTGATGGAGCTGTTGGGAATAAGCTTAGGGGTGGATCGGAGGCATTACAGAGACTTCTTTGAAGACGGAAAGTGTATAATGAGATGCAACTACTACCCTCCTTGCCAAGACCCCAGTCTTGTGCTTGGCACCGGACCCCATTCTGACCCAACTTCCTTAACCATACTTCATCAAGACCAAGTCGGAGGCCTTCAGGTTTTTCTCCATAACAAGTGGCGCTTCCTTCCACCTCTTCCCAATGCTCTCCTTATCAACATTGGTGACACCTTTACGGCATTATCAAATGGAAGATACAAGAGTTGCGTACATAGAGCAGTGGTGAAGAGGTACATGGAGAGGAGGTCATTGGCATTCTTTGTGTGCCCAAAAGAAGACAAAGTGGTGAGACCCCCTCAAGATTTGGTGGTCAGGGATGGGACAAAAATGTACCCTGATTTCACATGGTCCGATTTCCTTCATTTCACACAAAACCACTACAGAGCCGACGATGCCACTCTCCACAACTTCACCCACTGGTTCCTATCCTCCAAACCTActcactaa 1089 0.4986 MDSVSGWERGKSSNLDGWWVESERKFRWPEEYLVEAEGEVEAPIVDLAGFIAGDEEATRAAAALVSQACLSHGFFQVINHGIDSGLMGEALLHSDAFFKLPLHRKLSVGAGTGTGTKGGSLWGYSGAHTHRFSSRLPWKETLSFPFPHTYTNYFSSNIGQDFAHAGVVFHKYCEGMKELGLKLMELLGISLGVDRRHYRDFFEDGKCIMRCNYYPPCQDPSLVLGTGPHSDPTSLTILHQDQVGGLQVFLHNKWRFLPPLPNALLINIGDTFTALSNGRYKSCVHRAVVKRYMERRSLAFFVCPKEDKVVRPPQDLVVRDGTKMYPDFTWSDFLHFTQNHYRADDATLHNFTHWFLSSKPTH 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2847 362 Pfam non-haem dioxygenase in morphine synthesis N-terminal 43 146 IPR026992 -
Sto9g2847 362 Pfam 2OG-Fe(II) oxygenase superfamily 208 304 IPR044861 -
Sto9g2847 362 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 205 304 IPR005123 -
Sto9g2847 362 SUPERFAMILY Clavaminate synthase-like 31 343 - -
Sto9g2847 362 PRINTS Isopenicillin N synthase signature 65 82 - -
Sto9g2847 362 PRINTS Isopenicillin N synthase signature 229 250 - -
Sto9g2847 362 PRINTS Isopenicillin N synthase signature 264 290 - -
Sto9g2847 362 Gene3D - 19 342 IPR027443 -
Sto9g2847 362 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 23 358 - -
Sto9g2847 362 PANTHER GIBBERELLIN 20-OXIDASE 23 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2847 Sto-Chr9 29956754 29959304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2847 15 333 Glycosyltransferase AT5G59530 27.964 1.40e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2847 K05282 - gmx:100776707 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2847 9 29956754 29959304 Sto9g2847 9 29956754 29959304 ECH