Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2824 ATGGCTACATTTTGTTGGCCATATTTTGATCCCGAGTATGAGAACTTCAGCAACAGAATCAACCCTCCAAGGGTCTCTGTGGATAATGCTAGTTGCCATGATTGTACACTGATCAAGGTTGATAGTGTTAACAAACCTGGAATTCTGCTGGAAGTCGTGCAAATCCTTACAGACCTTGACTTCATAATCACCAAAGCTTACATATCTTCTGATGGTGGATGGTTTATGGATGTTTTTCATGTGACGGATCAGCAAGGAAAGAAGATAACAGACATCAAAACCATTGACTTCATAGAAAAGGCTCTGGGACCCAAGGGCCAGAGCACGGAATGCGTGAAGAGCTGGCCAGCTAAACGGGTTGGGGTGCACTCCGTTGGTGATCACACAGCCATTGAGCTCATTGGCAGAGACCGCCCAGGTCTCTTATCTGAGATCTCAGCTGTCCTTGCCAATCTCCAATTTAATGTGATTGCAGCAGAAGTGTGGACTCATAATAGGCGTGTAGCGTGTGTTCTTTATGTCAATGATGCTACCAATGGTGCTGGTGATGACCTGAACAAATTATCTGTGATGGAGGAGCAGCTCAACAATATCCTACGCGGATGTGAGGAGGATGAGAAAGTGGCTCGCACTAGTTTCTCCATGGGCTTCACCCATATGGATAGGCGGCTCCATCAAATGTTGTTTGCTGATCGGGATTATGAATGTGCTGGATTAACAGCAGAAGTTGATTATCCTCCCTCTTCCAGGCCAAAAATAACAATAGAGCGTTGTGAGGAAAAAGGGTACTCAGTGGTTAGTGTCAAGTGCAAAGATCGGGCAAAACTGATGTTTGACATTGTTTGCACCCTCACCGACATGCAGTATGTTGTTTTCCATGCTACAATCTCATCAGATGGCCCTCATGCATCCCAGGAGTACTTTATTCGACACATGGATGGATGCACGCTTGATACTGAAGGAGAGGAAGAAAGAGTCATTAAATGTATTGAAGCTGCTATCCAAAGAAGAGTAAGCGAGGTAATGTGCGGTTTAAAATTGATTTCTATGCTCTTCTGTAACGTTACAAAAAAGAAGTCAGGGAAGAACTTCTGGTTCTCAGCTCTGACAGAAAGTTTTCTGAATTTAACAGAATTAATGCACTTTGCATATGCAGCTATCTACTTGTATTGTTGCAATGGTACGGCAGTTACTTACATGGGGCTAGGTTCCACTCAGATTGGTGTAAGCCTTGAGCTGTGTGCAAAGGACAGAGTAGGATTGCTGTCTGAAGTAACTAGGATTCTACGAGAGAATGGGTTGACAGTTTGTAGGGCAGGTATATCTACCATTGGAGAGCAAGCACTGAATGTGTTCTACGTGAGAGATGCATCTGGAAATCCAGTGGACACGAAGATTGTTGAAACACTTCGCAAAGAGATTGGGCAGACAATGATGGTCAAAGTGAAGAGGGTACCAGCCAACTCCAAGGTACCTGAGACCCGAGGATGGACTAAAACAAGCTTCTTCTTTGGGAACTTGTTGGAAAGATTCTTGTCCTAA 1542 0.4423 MATFCWPYFDPEYENFSNRINPPRVSVDNASCHDCTLIKVDSVNKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGKKITDIKTIDFIEKALGPKGQSTECVKSWPAKRVGVHSVGDHTAIELIGRDRPGLLSEISAVLANLQFNVIAAEVWTHNRRVACVLYVNDATNGAGDDLNKLSVMEEQLNNILRGCEEDEKVARTSFSMGFTHMDRRLHQMLFADRDYECAGLTAEVDYPPSSRPKITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATISSDGPHASQEYFIRHMDGCTLDTEGEEERVIKCIEAAIQRRVSEVMCGLKLISMLFCNVTKKKSGKNFWFSALTESFLNLTELMHFAYAAIYLYCCNGTAVTYMGLGSTQIGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGISTIGEQALNVFYVRDASGNPVDTKIVETLRKEIGQTMMVKVKRVPANSKVPETRGWTKTSFFFGNLLERFLS 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2824 513 Gene3D - 128 208 - -
Sto9g2824 513 SUPERFAMILY ACT-like 125 201 IPR045865 -
Sto9g2824 513 ProSiteProfiles ACT domain profile. 37 116 IPR002912 -
Sto9g2824 513 ProSiteProfiles ACT domain profile. 130 213 IPR002912 -
Sto9g2824 513 ProSiteProfiles ACT domain profile. 410 487 IPR002912 -
Sto9g2824 513 Pfam ACT domain 130 167 IPR002912 -
Sto9g2824 513 Pfam ACT domain 37 85 IPR002912 -
Sto9g2824 513 Gene3D - 408 486 - -
Sto9g2824 513 SUPERFAMILY ACT-like 32 106 IPR045865 -
Sto9g2824 513 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 407 512 - -
Sto9g2824 513 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 4 342 - -
Sto9g2824 513 CDD ACT_ACR_1 35 106 - -
Sto9g2824 513 CDD ACT_ACR_4 408 479 - -
Sto9g2824 513 CDD ACT_ACR_3 263 337 - -
Sto9g2824 513 SUPERFAMILY ACT-like 410 475 IPR045865 -
Sto9g2824 513 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 342 IPR040217 -
Sto9g2824 513 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 407 512 IPR040217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2824 Sto-Chr9 29805797 29809842 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2824 - - gmx:121172621 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2824 9 29805797 29809842 Sto9g2824 9 29805797 29809842 ECH