Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2805 ATGTGCCTTCGTTTCTCAGATCATTCTCGCGCGTTAACACGAATAATTGCTGATCTCAGATCAAAATCGATGCTCCCTGACCCTTGCCTAAGTgaagaaacaaacaaaagaagGCCTCAAAGAAGTAAGGACTTTAAAGACGATGAGAAGGCATGGCATGCTCCGTTACAAGATAGGAACATTAATTGCAAGCCTACCTTGAAATTGGTCATGGTTATTGTTATATTGGGAACTTTAGTCACAATTTTCTATCCACCCTCTATTTATGATACTGATCATCTATCAAAATCTATAACAGGGGCTACTTTGGTAGACAAATGGAAAAGAGAGTTCGATGCTAGTGATCAGCGTTATGTATCATATTTGAATATTGAGTGGAACCAAATATTAAAAGTTCTGGTAAAATTGATAGACAGGAAGGCATATCAGGGAGTTGGCTTGTTGAACTTCAATGACAGTGAGGTTGACCACTGGAAGCAGCTGATACCAGAAGCCCAACACATAGTACTTGACCTGCATTATGCTTCAAGTAACATTACATGGGACATCCTCTACCCTGAATGGatagacgaagaagaagaacttGCGGTTCCTACTTGTCCTGCACTACCTAAGATTCAGGTACCTAACACACCACGGCTTGATCTAATTGCTGTCAAGCTTCCGTGCAACAAGACAGGGAGTTGGTCAAGAGATGTGGCTCGTTTGCACTTGCAGCTTGAAGCAGCAAGAGTAGCTGCCGCTTCCAAAGGATATCATCCACTGCATCTACTTTTGGTCACTGACTGCTTACCTATCCCAAACCTCTTTACTTGCAAGGAACTCATTCAACGCGAAGGAAGTGCATGGCTCTATGAACCCAACCTCAATACGCTGAGAGATAAGCTGCAGCTGCCAGTCGGTTCATGCGAGCTAGCAGTTCCTCTGATTGCCAAAGAACAATTTTACTCGGGAAGGGCACATCGAGAAGCATATGCAACCATCCTACACTCTGCAGCGTTGTATGTTTGTGGAGCCATTGCTGCAGCTCAGAGTATTCGCATGGCTGGTTCAACCCGAGATCTTGTGATTCTTGTTGATGAAACAATTAGTGAGTATCATAGAGGGGGCTTGGAGGCTGCTGGATGGAAGATCCATACAATCCAAAGAATCAGGAATCCAAAAGCCGAACCGGAGGCATATAACGAGTGGAACTACAGCAAATTTCGCCTCTGGCAGCTAACAGAATATGACAAAATCATTTTCATCGATGCTGACATGCTCATACTCAGAAACATTGATTTCCTTTTTGAAATGCCGGAAATTTCAGCCATAGGAAACAATGCTACCCTATTCAACTCAGGTGTAATGGTGGTTGAACCATCCAATTGTACATTTCAGCTCCTAATGGATCACATCAACGAAATTGTCTCCTACAATGGTGGAGATCAGGGGTATCTGAATGAAATCTTCACATGGTGGCATCGGATTCCGAAACACATGAACTTCTTGAAGCACTTTTGGGAAGGTGATGATGAAaagcaaagaaaaatgaaaacccATCTCTTTGGAGCTGATCCTCCAATTCTTTATGTCCTCCACTATTTGGGTTATAAACCATGGCTTTGCTTCCGAGACTATGACTGCAACTGGAACGCAGACAATCTTCAAGGGTTTGCAAGCGATGTAGCTCATGCAAGATGGTGGAAGGTGCATGATGCCATGCCAGAAAAGTTACAGAAGTTCTGTTTGCTTCGTACTAAGCAGAAGGCAGCATTAGAGTGGGATCGcagacaagcagagaaaggAAACTACGCTGATGGTCACTGGAAAATTAAGATACAAGACCAGCGTCTAAATACGTGCATCGAGAGATTCTGCTACTGGGAGAGCATGTTATGGCATTGGGGTGAAACCAATTGGACGAATAATGCTACCGCTAATGGACCACCACCTGTCATCACCACCAAAGCTCTTTCTTCCTCATGA 1968 0.4207 MCLRFSDHSRALTRIIADLRSKSMLPDPCLSEETNKRRPQRSKDFKDDEKAWHAPLQDRNINCKPTLKLVMVIVILGTLVTIFYPPSIYDTDHLSKSITGATLVDKWKREFDASDQRYVSYLNIEWNQILKVLVKLIDRKAYQGVGLLNFNDSEVDHWKQLIPEAQHIVLDLHYASSNITWDILYPEWIDEEEELAVPTCPALPKIQVPNTPRLDLIAVKLPCNKTGSWSRDVARLHLQLEAARVAAASKGYHPLHLLLVTDCLPIPNLFTCKELIQREGSAWLYEPNLNTLRDKLQLPVGSCELAVPLIAKEQFYSGRAHREAYATILHSAALYVCGAIAAAQSIRMAGSTRDLVILVDETISEYHRGGLEAAGWKIHTIQRIRNPKAEPEAYNEWNYSKFRLWQLTEYDKIIFIDADMLILRNIDFLFEMPEISAIGNNATLFNSGVMVVEPSNCTFQLLMDHINEIVSYNGGDQGYLNEIFTWWHRIPKHMNFLKHFWEGDDEKQRKMKTHLFGADPPILYVLHYLGYKPWLCFRDYDCNWNADNLQGFASDVAHARWWKVHDAMPEKLQKFCLLRTKQKAALEWDRRQAEKGNYADGHWKIKIQDQRLNTCIERFCYWESMLWHWGETNWTNNATANGPPPVITTKALSSS 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2805 655 MobiDBLite consensus disorder prediction 31 49 - -
Sto9g2805 655 Pfam Glycosyl transferase family 8 331 433 IPR002495 GO:0016757
Sto9g2805 655 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 320 571 IPR029044 -
Sto9g2805 655 SUPERFAMILY Nucleotide-diphospho-sugar transferases 323 573 IPR029044 -
Sto9g2805 655 CDD GT8_Glycogenin 323 568 - -
Sto9g2805 655 PANTHER GLYCOGENIN SUBFAMILY MEMBER 25 636 - -
Sto9g2805 655 MobiDBLite consensus disorder prediction 27 49 - -
Sto9g2805 655 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 3-RELATED 25 636 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2805 Sto-Chr9 29670413 29673460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2805 66 631 Glycosyltransferase AT1G77130 70.804 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2805 K20890 - gmx:100796246 1093.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2805 9 29670413 29673460 Sto9g2805 9 29670413 29673460 ECH