Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2802 ATGGTTCTGATATCGGCTGTACGGGATTATGTCAACAGGATGTTGCAGGACATCTCTGGCATGAAGGTTCTCATCCTAGATTCTCAAACGGTAAGTATTGTGAGTGTTGTGTATTCACAGTCAGAGCTTCTTCAGAAAGAAGTATTTTTGGTAGAGTTGGTGGATTCCATTTCCAAGTCAAGAGAATCAATGTCACATCTCAAGGCTGTTTGCTTCCTTCGACCTACATCAGAGAACATCCAGCAGTTGCGCCGCCAGATAGCCAATCCTAGATTTGGAGAATACCATTTATTTTTCTCCAACATGTTGAAGGACACTCAGATTCACATACTTGCTGATTCAGATGAACAGGAAGTTGTCCAGCAAGTTCAGGAGTTTTATGCAGACTTTGTTGCACTTGATCCTTACCACTTTACCTTGAATATGCCTTCAAATTACATTTATATGCTCCCAGCAGTGGTGGATCCTTCAACATTGCAGCGCTTCTCTGATCGAGTTGTTGACAGTATTGCAGCTGTTTTTCTGGCATTAAAACGAAGACCAGTAATTAGATACCAAAGGACATCCGACATTGCAAAAAGAATAGCACAGGAAGCAGCTAAACTGATGTACCAACAGGAAAGTGGCCTTTTTGATTTTAGGCGAACAGAAGTTTCTCCGTTATTGTTGGTGATTGACAGGAGGGATGATCCTGTAACTCCATTGCTAAATCAGTGGACCTATCAGGCAATGGTTCATGAACTCATAGGAATCCAAGACAACAAAGTAGACTTTAAGTCACTTGGTAACTTTCCAAAGGATCAGGAGGAGGTTGTGCTGTCATCAGAACAAGATTCCTTCTTCAAAGCTAATATGTATGAGAACTTTGGAGATATAGGTATGAATATCAAGCGGTTGGTGGATGAATTTCAGCAAGTGTCAAAGAGTAACCAGAACATCCAGACGATAGAGGACATGGCCAAATTTGTTGACAATTACCCTGAGTATAGAAAAATGCATGGAAATGTTTCAAAACATGTAACCTTGGTAACTGAAATGAGCAAGATAGTTCAAGAGAGAAAGCTTATGTTAGTTTCAGAAACAGAACAGGACTTGGCTTGCAATGGAGGACAAGGGGCTGCTTTTgagGCAGTGACAAATCTACTGAACAACGAGAGCATATCAGATGAGGACCGACTACGTTTAGTCATGTTGTACGCTTTGCGATATGAGAAGGATAGCCCTGTTCAGTTAATGCAACTTTTCAACAAACTGGCTTCCCGATCAGCCAAGTACAAACCTGGgCTTGTCCAGTTTCTTTTGAAGCAAGCAGGTGTTGACAAGAGAACTGGTGATCTTTATGGAAGTCGTGATCTACTAAATATAGCCCGTAACATGGCTCGTGGATTGAAGGGTGTGGAGAATGTGTACACTCAGCATCAACCACTTCTGTTCCAAACCATGGAAAGTATTGTCAAAGGGCGATTGAGAGATGTGGACTACCCATTTGTTGGAAATCACTTTCAACAGGGAAGGCCACAGGAAGTCATCATCTTCATTGTTGGTGGAACGACTTATGAGGAGTCACGTTGTGTTGCTATGCAAAATGCTAGCAATACTGGAATTCGTTTTATACTCTGTGGCTCTGCAATTCTTAATACTAGGAGGTTTCTTAGGGACTTGGAAGAAGCCCAGAGGGCGGTTCGTTCTAGCAGCTCTGTTTGA 1704 0.419 MVLISAVRDYVNRMLQDISGMKVLILDSQTVSIVSVVYSQSELLQKEVFLVELVDSISKSRESMSHLKAVCFLRPTSENIQQLRRQIANPRFGEYHLFFSNMLKDTQIHILADSDEQEVVQQVQEFYADFVALDPYHFTLNMPSNYIYMLPAVVDPSTLQRFSDRVVDSIAAVFLALKRRPVIRYQRTSDIAKRIAQEAAKLMYQQESGLFDFRRTEVSPLLLVIDRRDDPVTPLLNQWTYQAMVHELIGIQDNKVDFKSLGNFPKDQEEVVLSSEQDSFFKANMYENFGDIGMNIKRLVDEFQQVSKSNQNIQTIEDMAKFVDNYPEYRKMHGNVSKHVTLVTEMSKIVQERKLMLVSETEQDLACNGGQGAAFEAVTNLLNNESISDEDRLRLVMLYALRYEKDSPVQLMQLFNKLASRSAKYKPGLVQFLLKQAGVDKRTGDLYGSRDLLNIARNMARGLKGVENVYTQHQPLLFQTMESIVKGRLRDVDYPFVGNHFQQGRPQEVIIFIVGGTTYEESRCVAMQNASNTGIRFILCGSAILNTRRFLRDLEEAQRAVRSSSSV 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2802 567 PIRSF VPS45_Sec1 1 566 IPR001619 GO:0016192
Sto9g2802 567 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 45 3 555 - -
Sto9g2802 567 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 3 555 IPR001619 GO:0016192
Sto9g2802 567 Pfam Sec1 family 22 553 IPR001619 GO:0016192
Sto9g2802 567 Gene3D - 353 474 - -
Sto9g2802 567 SUPERFAMILY Sec1/munc18-like (SM) proteins 3 556 IPR036045 -
Sto9g2802 567 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 238 351 IPR043127 -
Sto9g2802 567 Gene3D - 138 555 IPR027482 -
Sto9g2802 567 Gene3D - 4 128 IPR043154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2802 Sto-Chr9 29661998 29667484 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2802 K12479 - gmx:100782786 1011.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2802 9 29661998 29667484 Sto9g2802 9 29661998 29667484 ECH