Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2794 ATGGCATCTCAATCTCTATCCCAAAACTCTGCTTGCCTCAGCTCCAAGACCAACAAGAATTTCAATGCCCAATTGTTGTACAACAAGAGGCCTTTTAGCAATCTAGTAGTAGCCAATCTCCAACACAGGAAACCCAGGTTTCGTCCATTTGTATTAGAAGCACAGAAGAAGCAAACAGAAGAGAAAAAGGAGAAATGGAAAGCACGGGGAAGCGACGATGGATCATGCGGTGTAGTCCCCGAGTTCCTGCCACATCCTACGGTGGAAGAGACTGTGCTTGAATTCTATGATGCCTTCAAAGCAGGAGACACTAACAAGTTGGAGCAACTTGTGTCGCCTCACTGTTTGTACCAGGATTTGGTCTTCTACGGTCCCCATGAAGGCAGAGAGGATGTCATCAATTTTTTGCAGAGCGCAAGGGATGCCATGGGTAAAAATATCCACCTTGTCCTTGAACAAGTGGCGGAGACCGACCATCTTAAGGCCACTGTGCATTGGCACCTACAGTGGAGAGATAAGAAAATACCCTTCACCCATGGTTGCAGATACTTTACGTTAGAAAGAGTGCAAGGAAGACTACTTATTAGGCAAATAACCGGTGTGGAAGAACTTCCATTAAGGCCTAGTGAACTATCACTgAAACTATTGAAAATGGCAGGCAATCTTTTTGATAGCTATCCTCTAGCAGCTGATATGATGCTGTCGGCCTATGGGTCATCAGATGAAGGGAAACATGAAGACGACAAGCATTTCAGTAGCGAAACAAGAAGATCAAGAATTAGTATGGAATTCCCAGACATGAATCCGACGGGGAAATCACCAAGAAGAGAACTGCAAGGCCCACGTCCCACGCCTCTCAGGATACACAAAGATTCTCACAAGATCAAGAAACCGCCGTTGGCGCCGCAGCAACCGCCCCAACCGCAACCGCCGCCGCGCCAGCCTGTCATCATCTACACCGTCTCTCCCAAGATCATCCACACCACGCCGGGTGACTTCATGGATCTTGTTCAACGCCTCACTGGCTGtacttcctcttcctcttcttcttccaataTGGTGTCCACGTCATCAAATGATCCTTTCAATCGCAATAATGGTGGCGATATGGTATCCCCGGCCGCGCGCTACGCCTCTATAGAGAAGGCCAGGACTCCCCAAGGCAAGAAATTAGGCGCAgcggataataataataataataatattggtgGTGGTGACGTGGCAGGGATGATGATGGATGTGAGTAGAGATGGAGGCGGGGTGATTGAGCGGCCGGCAGCGGGGATGTTCCCGGGGATTTTGTCGCCGGGACCGGGTGCTCTGTCTCCGATTCCAGCGAGCTTCTTCTCGCCGGCGGCGGGGGATCCAACGGTGGCGGGAAGCAGCTTCCTTCACGATTTGAGCCCTGCACTTCACAGAAGTCTTATGGAGGGTAGTTTTGTGCCCAGCCCTTCTTACTTTGTTTCGCCTCGTACTCCTTCTATTGACTTGTTCAACAATTTCTTTGATTCTTAG 1515 0.4785 MASQSLSQNSACLSSKTNKNFNAQLLYNKRPFSNLVVANLQHRKPRFRPFVLEAQKKQTEEKKEKWKARGSDDGSCGVVPEFLPHPTVEETVLEFYDAFKAGDTNKLEQLVSPHCLYQDLVFYGPHEGREDVINFLQSARDAMGKNIHLVLEQVAETDHLKATVHWHLQWRDKKIPFTHGCRYFTLERVQGRLLIRQITGVEELPLRPSELSLKLLKMAGNLFDSYPLAADMMLSAYGSSDEGKHEDDKHFSSETRRSRISMEFPDMNPTGKSPRRELQGPRPTPLRIHKDSHKIKKPPLAPQQPPQPQPPPRQPVIIYTVSPKIIHTTPGDFMDLVQRLTGCTSSSSSSSNMVSTSSNDPFNRNNGGDMVSPAARYASIEKARTPQGKKLGAADNNNNNNIGGGDVAGMMMDVSRDGGGVIERPAAGMFPGILSPGPGALSPIPASFFSPAAGDPTVAGSSFLHDLSPALHRSLMEGSFVPSPSYFVSPRTPSIDLFNNFFDS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2794 504 Pfam VQ motif 320 346 IPR008889 -
Sto9g2794 504 CDD NTF2_like 88 196 - -
Sto9g2794 504 Gene3D - 85 196 - -
Sto9g2794 504 PANTHER NTF2-LIKE DOMAIN-CONTAINING PROTEIN-RELATED 11 236 - -
Sto9g2794 504 PANTHER NUCLEAR TRANSPORT FACTOR 2 (NTF2)-LIKE PROTEIN 11 236 - -
Sto9g2794 504 Pfam SnoaL-like domain 92 187 IPR037401 -
Sto9g2794 504 SUPERFAMILY NTF2-like 85 192 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2794 Sto-Chr9 29624345 29631413 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2794 K20725 - gmx:100807068 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2794 9 29624345 29631413 Sto9g2794 9 29624345 29631413 ECH