Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2783 ATGCTGATGCTCCCCTCTGCAAAAACTGCGCTTCTGCAGGGTAGAACCATTTTTTCCGTCATATGCACAAAATTCCCCAAGAAAACCATGTCTTCCGTCGCAGAAGACCCTGAAATGAAACACTTTGTGGACTACATTGACTCTCTCAAAAACTACGAGAAATCGGGCGTCCCAAGAGGTGCAGGTACCGATTCTCGCCAAGGATTTGATCTTGGGAGAATGACAAGGTTAATGCAGCGTTTTGGTAACCCTCAGTCTAAGTTCAAGGCCGTTCATATTGCTGGAACAAAGGGAAAGGGGTCAACAGCTGCATTCATTTCTAGTATTCTCAGGGCGGAAGGTTATTCTGTTGGTTGTTACACTAGTCCACATATCCAGACTATCAGGGAACGCATTTTACTAGGAAGATCTGGTGATCCTGTCTCTGCAAAAACATTGAATAATCTTTTTCATAGGATCAAGAAGAATCTTGACCAAGCAATGAATGAAGAAAATGGTCACATAAGTCATTTTGAGGTTTTTACTGCTGTGGCATTCATCCTATTTGCCGAAGAGAATGTTGACATTGCAGTTATTGAGGCTGGACTAGGGGGTGCACGTGATGCAACAAATATTTTATCCAGTTCTGGTCTTGCTGCATCAGTCATAACCACTGTAGGCGAGGAACATTTGGCTGCTCTTGGGGGTTCTTTGGAAACTATTGCAGTGGCTAAGTCAGGAATCATAAAACAAGGCCGCCCATTAGTGCTGGGCGGGCCATTTCTCCCTCATATTGAGTGCATTATTCGCAATAAAGCTGCATCCCTGGATTCACCAGTAGTATCAGCATCTGATGCTGGCAATATATGTACCATAAAGAGTGTTGGCATGCTTGACGGCAGACCTTATCAATCTTGTGATATAACGATAAAAGTTGAAAAAGACTTGAAGCTGTCCTGTGAATTACTTGATATAAAGCTGAGCATGCTTGGAAGTCACCAACTACAAAATGCAGCAACTGCTACTTGTGTGGCACTCTGCCTTCGTAATTTAGGATGGAAAATTTCTGATGACTCTATAAGGGCTGGTTTACAGCATACATGCCTCCTTGGAAGGAGTCAATTCCTAACTTCTAAAGAAGCTGGGCTGTTAGGACTTGCTGAAGCAACAATATTGCTTGATGGAGCTCATACCAAAGAATCCGCCAAAGCACTGATGAATATGATAAGGATGGCATATCCAGCGGCTCGATTGGGTTTTATTGTTGCTATGGCAAGTGATAAAGATCATGTAGGTTTTGCCAGGGAAATTCTCTCAGGGAAACATGTAGAGACTGTTGTATTGACAGAAGCTGCTATTGCTGGAGGTGTAACTCGAACAACTTCAGCTGCTTTGCTGAAAGATTCTTGGATTCAAGCTTCTGAAGAACTTGGCATTGGAATTGTTCATGATGGAATGGTGGAATACAAAGAATTGCTAAAGGATCAAACAGTAAGTTCTGTGAGGAATATGCATGAGGGAAGAATTATATTGGCTACTGAGACTTCTTTAAACAGTTGTTTGAGAAACACAGATAGGATTCTGAGAAGAAATACAGGAGATGAAAGGGGTATTATAGTCATTACAGGATCCCTGCATATTGTTTCCGTAGTTTTAGCTAATCTGGTTGGTTAA 1653 0.4211 MLMLPSAKTALLQGRTIFSVICTKFPKKTMSSVAEDPEMKHFVDYIDSLKNYEKSGVPRGAGTDSRQGFDLGRMTRLMQRFGNPQSKFKAVHIAGTKGKGSTAAFISSILRAEGYSVGCYTSPHIQTIRERILLGRSGDPVSAKTLNNLFHRIKKNLDQAMNEENGHISHFEVFTAVAFILFAEENVDIAVIEAGLGGARDATNILSSSGLAASVITTVGEEHLAALGGSLETIAVAKSGIIKQGRPLVLGGPFLPHIECIIRNKAASLDSPVVSASDAGNICTIKSVGMLDGRPYQSCDITIKVEKDLKLSCELLDIKLSMLGSHQLQNAATATCVALCLRNLGWKISDDSIRAGLQHTCLLGRSQFLTSKEAGLLGLAEATILLDGAHTKESAKALMNMIRMAYPAARLGFIVAMASDKDHVGFAREILSGKHVETVVLTEAAIAGGVTRTTSAALLKDSWIQASEELGIGIVHDGMVEYKELLKDQTVSSVRNMHEGRIILATETSLNSCLRNTDRILRRNTGDERGIIVITGSLHIVSVVLANLVG 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2783 550 Gene3D - 364 549 IPR036615 GO:0009058|GO:0016881
Sto9g2783 550 ProSitePatterns Folylpolyglutamate synthase signature 1. 91 114 IPR018109 GO:0004326|GO:0005524|GO:0009396
Sto9g2783 550 Coils Coil 143 163 - -
Sto9g2783 550 PANTHER FOLYLPOLYGLUTAMATE SYNTHASE-RELATED 32 546 IPR001645 GO:0004326|GO:0005524|GO:0009396
Sto9g2783 550 SUPERFAMILY MurD-like peptide ligases, peptide-binding domain 364 546 IPR036615 GO:0009058|GO:0016881
Sto9g2783 550 TIGRFAM folC: bifunctional protein FolC 71 546 IPR001645 GO:0004326|GO:0005524|GO:0009396
Sto9g2783 550 PANTHER DIHYDROFOLATE SYNTHETASE-RELATED 32 546 - -
Sto9g2783 550 Gene3D - 57 362 IPR036565 GO:0005524|GO:0009058
Sto9g2783 550 SUPERFAMILY MurD-like peptide ligases, catalytic domain 68 361 IPR036565 GO:0005524|GO:0009058
Sto9g2783 550 Pfam Mur ligase middle domain 93 338 IPR013221 GO:0005524|GO:0009058|GO:0016881
Sto9g2783 550 ProSitePatterns Folylpolyglutamate synthase signature 2. 191 206 IPR018109 GO:0004326|GO:0005524|GO:0009396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2783 Sto-Chr9 29541386 29546215 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2783 K20457 - gmx:100816933 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2783 9 29541386 29546215 Sto9g2783 9 29541386 29546215 ECH