Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2758 ATGTCCAATCCCCTTTCATTTCAACACCTTCCCACTCGCTCTTCATGTGCTATTCCCTCCATAAACAACCCCCAACTGAATGCACGTCTCCCAACTAGATTCACAGGCAGACTCACTCGATCCTCTGCTACTAAGAAATCGTCATGTCCGCTGCAGAAAAACATTTTTGGAACCCGATTGCGTTCATGCAGAGCGCCGGGAACCGAGAGGCTGCACGTCTGGAAATCGGACGGTCCGGGGCGCTCGCCGAAGCTAAGGGTTGTTGTTCGGTCCGCATTGTCGGCGGTGCCTGAAAAGCCCCTTGGTCTCTATGATCCGGCCTTGGATAAGGACTCTTGCGGGGTTGGATTCGTTGCGGAGTTGTCCGGCGAGAGTAATCGCCAAACGGTGACTGACGCTCTGGAGATGTTGGTGCGCATGACGCACAGAGGTGCTTGTGGTTGCGAAGCCAACACTGGAGATGGAGCCGGGATTCTTGTGGCTCTTCCTCACGAGTTTTACAGGCAGGTAGCCAAGGATGTTGGATTTGAGCTTCCACCACCTGGACAATATGCTGTTGGCATGTTTTTCTTGCCTACCTCGGAGAGTCGTAGGGAAGacagcaaaaaaatatttagagaGGTTGCGGAATCTCTTGGGCACTCTGTTCTTGGTTGGCGTTCTGTGCCTACAGACAACTCAGGATTGGGTAAATCAGCCCTGCAGACAGAACCAGTCATTGAGCAAGTGTTCCTGACGCCTAGTCCTAGATCAAAACTTGATCTGGAAAGACAGATGTACATATTAAGAAAGGTCTCCATGGTTGCAATTAAATCTGCATTAAACCTACAACTTGATGGCATTACAGATTTCTATATCTGTTCACTTTCATCAAGGACTGTTGTTTACAAGGGTCAGTTAACACCAGCTCAGTTGAGGGATTACTATTTTGCGGACCTTGGCAATGAAAGGTTTACGAGCTACATGGCCCTGATACATTCTCGATTTTCTACGAATACATTTCCAAGCTGGGATCGTGCTCAACCGATGCGTGTGTTGGGTCACAATGGAGAAATCAACACACTCAGAGGCAATGTTAACTGGATGAAGGCACGTGAGGGTCTATTGAAGTGCAAGGAGCTTGGTTTATCGGAGAGTGAGCTAAAGAACCTTTTGCCCATTGTGAATGTAAATTCATCCGACTCAGGAGCGTTTGATGGTGTTCTTGAGTTTTTGGTTCAATCTGGAAGAAGTCTTCCTGAAGCTGTTATGATGATGATTCCTGAGGCATGgcaaaatgacaaaaatatggATCCTCAGCGTAGAGCATTTTATGAATACTTCTCAGCTCTCATGGAGCCATGGGATGGACCTGCTCTCATATCATTTACCGATGGTCATTATCTTGGAGCTACATTGGATAGGAATGGACTGCGTCCTGGTCGTTTCTATGTCACCCACAGTGGACGAGTCATAATGGCCAGTGAAGTTGGTGTTGTAGACATTCCTCCTGAAGATGTGTGTAGGAAAGGAAGACTAAACCCTGGCATGATGCTTCTAGTTGATTTTGAGAAGCATATTGTTGTAAATGATGATGCCTTAAAGGAACAGTATTCATTGGCAAGACCTTATGGGGAATGGCTCAAAAGGCAGAAGATTGAACTCAAAGACATAGTTGTGTCTGTTCATGAATCTCAGAGAGTGCCACCAGCCATAGCAGGAGTTGTTACAGCATCTAGTGATGATGTGAATATGGAAAACTTGGGAATTCATGGGTTATTGGCACCTTTGAAAGCTTTTGGTTATACAGTTGAATCCTTGGAAATGTTATTGCTTCCCATGGCAAAAGATGGTGTTGAAGCCCTTGGATCAATGGGAAATGATACTCCATTAGCTGTCATGTCTAATAGACAAAAGCTGACCTTTGAGTACTTCAAGCAATTGTTTGCCCAAGTGACAAACCCACCCATTGATCCTATTCGTGAGAAAATAGTCACTTCAATGGAATGTATGATTGGTCCAGAAGGTGATCTGACGGAAACCTCTGAGGAACAATGCCACCGTCTTTCACTAAAAGGTCCCCTCTTATCTATTGATGAAATGGAAGCTGTTAAAAATATGAATCATAGGGGATGGAGAAGCAAAGTTATAGACATAACATACTCTAAGGACCATGGTATGAGAGGATTGAAGGAAGCAGTGGACAGGATTTGTGAAGAAGCGCATGATGCAATTAATGAGGGCTACACAACGCTTGTGCTATCTGATAGAGCCTTCTCAAGGAAACGTGTTGCTGTGAGCTCTCTTCTAGCTGTTGGCGCTGTCCATCAACATCTGGTTAAAACACTTGAGCGCACTAGAGTTGCTTTAATAGTTGAATCTGCTGAGCCACGTGAAGTGCACCATTTTTGCACCCTTGTTGGTTTTGGTGCCGATGCTATATGCCCATATCTGGCCATTGAAGCAATCTGGCGACTGCAGGTTGATGGGAAAATTCCACCAAAAGCAAGTGGTGAGTTCCACTCAAAAAATGAGCTGGTCAAGAAGTATTTCAAAGCAAGCAACTATGGAATGATGAAGGTTCTTGCAAAGATGGGAATATCCACTTTGGCTTCCTACAAAGGTGCCCAAATTTTTGAAGCTCTGGGTCTTTCTTCAGAAGTGATTGATAAGTGCTTTGCTGGAACCCCTAGTCGAGTTGAGGGTGCAACATTTGAGATGCTTGGTCGAGATGCCCTCCAACTGCATGAGTTGGCATTTCCTTCTCGTATTTTCTCTCCTGGAAGTGCTGAAGCTGTAGCGTTGCCAAATCCCGGGGATTATCATTGGAGAAAAGGTGGTGAAGTTCACCTGAATGATCCACTTGCTATAGCCAAACTTCAAGAGGCTGCCAGAAGTAACAGCAGAGATGCCTACAAACAGTACTCCAAACTCATTCATGAATTAAACAAAGCTTGCAACTTGCGGGGATTGCTGAAATTCAAAGATGTAGCAGGGAAGATTCCCCTTGATGAAGTGGAGCCAGCTAGTGAGATAGTTAAGCGATTTTGCACTGGGGCAATGAGTTATGGGTCAATATCATTGGAGGCTCACTCAACACTGGCAATGGCCATGAATAAACTTGGAGGAAAATCAAACACAGGTGAGGGAGGCGAGCAGCCCTCTCGTATGGAGCCTCTTCCTGATGGCTCAATGAACCCCAAAAGGAGTGCCATCAAGCAAGTTGCTAGTGGAAGATTTGGAGTTACTAGTTATTACCTTACAAATGCTGACGAACTGCAGATCAAGATGGCCCAGGGAGCAAAGCCTGGTGAGGGAGGTGAACTTCCTGGCCACAAGGTTGTAGGAGAGATTGCTGTCACCAGGAATTCAACTGCTGGGGTAGGACTTATCAGTCCACCACCCCATCATGATATTTACTCCATTGAAGACCTTGCCCAATTAATTCATGACCTAAAGaaTGCCAACCCATCTGCTCGAATCAGTGTGAAGTTAGTATCTGAAGTTGGAGTTGGCATAATCGCTAGTGGAGTTGTTAAAGGGCATGCCGACCATGTCTTGATCTCAGGTCATGATGGAGGTACAGGAGCATCTAGATGGACTGGTATAAAGAATGCTGGGCTTCCTTGGGAGCTTGGCTTGGCTGAGACCCACCAGACTTTGGTTGCTAATGACTTGCGTGGTCGCACAGTTCTCCAAACTGATGGTCAACTCAAAACTGGTAGAGATGTTGCCATAGCTGCACTTCTTGGTGCAGAAGAGTTTGGTTTCAGTACAGCTCCACTCATAACTCTTGGCTGCATTATGATGCGAAAGTGCCATAAGAACACCTGTCCTGTTGGCATTGCAACCCAAGATCCAGTACTTAGAGAGAAGTTTGCTGGAGAACCAGAGCATGTTATTAACTTTTTCTTCATGGTTGCGGAGGAGATGAGAGAAATTATGTctcatttagggtttcgaactGTTAATGAGATGGTTGGCCGTTCAGATATGCTTGAAGTTGACAAAGAAGTTATTAAGAGCAGTCAGAAGCTGGAGAACATTGATCTTTCTCTGTTGCTTAGACCTGCAGCTGAATTACGGCCAGAAGCTGCTCAATATTGTGTCCAAAAGCAAGATCACAGTTTGGACATGGCCTTGGACAATAAGCTTATAAGTCTATCCGATGCTGCTTTGGAAAAGGGTCTCCCAGTATACATTGAAACTCCAATCTACAATGTAAACCGGGCTGTGGGAACAATGCTTAGCCACGAGGTGACAAAACGGTACCATTTGGCTGGTCTTCCAACTGATACCATTCATATAAGATTTAATGGAAGTGCAGGTCAGAGCTTTGGTGCTTTCCTCTGTCCTGGTGTCACTTTGGAACTTGAAGGTGATGGAAATGACTATGTTGGTAAAGGATTGTCTGGTGGGAAGGTTGTAGTATACCCGCCAAATGGAAGCAACTTTGATCCTAAGGAGAACATTGTAATTGGTAATGTGGCTTTGTATGGTGCAACAAGTGGTGAAGCTTATTTCAACGGAATGGCAGCAGAAAGATTTTGTGTACGTAATTCTGGGGCTAAAGCAGTTGTGGAAGGTGTTGGTGACCATGGATGTGAGTACATGACAGGCGGAACAGTTGTTGTGCTTGGAAAAACTGGTAGAAATTTTGCAGCAGGTATGAGTGGAGGTATTGCTTATGTGCTAGATATTGATGACAAATTCCACTCTCGGTGCAACCATGAGCTTGTAGATCTGGACAAGGTTGAAGATGAGGAGGATATAATGACCCTCAGAATGTTGATACAGCAACATCAACGCCACACAAATAGTGAACTTGCTAAAGAAGTGCTTGCTAACTTTGAGAATCTTCTTCCTAAATTTATCAAGGTGTTCCCTAGGGAGTATAAGCGTGTACTTGCAAGTATGAAGGCAGAGGCAGCCTCCAAAGAGGCAGTGGAGGTTGCTGCTAAAGATGCAGAGGAGCCAGATGAAGGAGAACCGGCGGAAAAAGATGCTTTTGAAGAGCTTAAGAAACTCGCTGCTGCATCTTTGAATGAAAAACCAAGCCAGGCTGAGCAAGCTGAAGCACCCAAGAGGCCTAGTCGAGTTGCTCATGCTGTTAAACATAGAGGTTTTGTTGCTTATGAGCGTGAGGGTGTTCAGTACCGGGACCCTAATGTTCGCATGAATGATTGGAAAGAAGTCATGGAGGAGTCAAAGCCTGGTCCACTTTTGAAGACCCAGTCAGCCCGTTGCATGGACTGTGGTACTCCTTTCTGTCATCAGGAAAATTCTGGATGTCCCCTCGGAAATAAAATACCTGAATTTAATGAGTTGGTATATCAAAATAGGTGGCGTGAAGCATTAGATCGGCTTCTTGAGACAAACAACTTCCCAGAGTTTACTGGTCGGGTGTGCCCAGCACCATGTGAAGGCTCTTGTGTCCTCGGTATTATTGAGAATCCTGTATCTATAAAAAGCATTGAATGTGCTATCATAGACAAGGCTTTTGAGGAAGGTTGGATGGTGCCACGTCCTCCATCCAAGAGAACTGGGAATAGAGTTGCAGTTGTTGGAAGTGGACCAGCAGGCTTGGCCACTGCTGATCAACTAAATAAAATGGGCCATACAGTAACTGTATATGAGAGAGCTGATAGGATTGGAGGGCTTATGATGTATGGTGTACCCAACATGAAAACTGACAAGGTGGATGTAGTTCAAAGGAGGGTCAACCTTATGGCTGAGGAGGGAGTCAATTTTGTGGTGAATGCTAATGTTGGAGTTGACCCCTTGTACTCTCTTGATCGGCTTCGAGAGGAAAATGATGCCATTGTTTTAACAGTAGGAGCCACAAAACCAAGGGATCTTCCTGTACCCGGAAGAGAGTTTTCAGGAGTTCATTTTGCTATGGAGTTTCTTCATGCAAACACCAAGAGCTTGCTTGATAGCAATCTCCAGGATGGTAACTACATTTCTGCCAAGGGCAAGAAAGTAGTGGTCATTGGTGGGGGTGACACTGGTACCGATTGCATTGGGACATCCATTCGTCATGGGTGCAGTAGCGTTGTAAATTTAGAACTTCTTCCTCAGCCACCACAGACTAGGGCCCCAGGCAACCCTTGGCCACAGTGGCCTCGTATATTCCGTGTAGATTATGGGCACCAGGAAGCTGCGACCAAATTTGGGAAAGACCCAAGATCTTACGAGGTATTGACCAAGCGATTTGTGGGAGATGAGAATGGAGCTGTAAAAGGACTTGAAGTGATACGTGTTCGCTGGGAGAAGGATGAAACTGGGAAGTTTCAGTTCAAGGAAGTTGAGGGCTCCGAGGAGATTATTGAGGCTGATTTAGTTTTACTAGCTATGGGATTCCTTGGCCCTGAGTCTACCATTGCTGAGAAACTGGGGATGGAAAGAGACAATAGGTCAAACTTCAAGGCAGATTATGGCCGCTTCTCAACCAGTGTCAAAGGTGTGTTTGCTGCCGGGGATTGTCGGCGTGGTCAGTCTCTGGTGGTATGGGCAATCTCAGAAGGGCGGCAAGCTGCTGCACAGGTTGATAAGTACCtcggagaagaagagagagatcaCAATATAGATGGAAATCAGGAGGAACTTATCAAGAGGCAGCAAGACCTTAACAAGAGGCACCAGGACAGCAGCAAACACACAGTAATGACTTAG 6654 0.451 MSNPLSFQHLPTRSSCAIPSINNPQLNARLPTRFTGRLTRSSATKKSSCPLQKNIFGTRLRSCRAPGTERLHVWKSDGPGRSPKLRVVVRSALSAVPEKPLGLYDPALDKDSCGVGFVAELSGESNRQTVTDALEMLVRMTHRGACGCEANTGDGAGILVALPHEFYRQVAKDVGFELPPPGQYAVGMFFLPTSESRREDSKKIFREVAESLGHSVLGWRSVPTDNSGLGKSALQTEPVIEQVFLTPSPRSKLDLERQMYILRKVSMVAIKSALNLQLDGITDFYICSLSSRTVVYKGQLTPAQLRDYYFADLGNERFTSYMALIHSRFSTNTFPSWDRAQPMRVLGHNGEINTLRGNVNWMKAREGLLKCKELGLSESELKNLLPIVNVNSSDSGAFDGVLEFLVQSGRSLPEAVMMMIPEAWQNDKNMDPQRRAFYEYFSALMEPWDGPALISFTDGHYLGATLDRNGLRPGRFYVTHSGRVIMASEVGVVDIPPEDVCRKGRLNPGMMLLVDFEKHIVVNDDALKEQYSLARPYGEWLKRQKIELKDIVVSVHESQRVPPAIAGVVTASSDDVNMENLGIHGLLAPLKAFGYTVESLEMLLLPMAKDGVEALGSMGNDTPLAVMSNRQKLTFEYFKQLFAQVTNPPIDPIREKIVTSMECMIGPEGDLTETSEEQCHRLSLKGPLLSIDEMEAVKNMNHRGWRSKVIDITYSKDHGMRGLKEAVDRICEEAHDAINEGYTTLVLSDRAFSRKRVAVSSLLAVGAVHQHLVKTLERTRVALIVESAEPREVHHFCTLVGFGADAICPYLAIEAIWRLQVDGKIPPKASGEFHSKNELVKKYFKASNYGMMKVLAKMGISTLASYKGAQIFEALGLSSEVIDKCFAGTPSRVEGATFEMLGRDALQLHELAFPSRIFSPGSAEAVALPNPGDYHWRKGGEVHLNDPLAIAKLQEAARSNSRDAYKQYSKLIHELNKACNLRGLLKFKDVAGKIPLDEVEPASEIVKRFCTGAMSYGSISLEAHSTLAMAMNKLGGKSNTGEGGEQPSRMEPLPDGSMNPKRSAIKQVASGRFGVTSYYLTNADELQIKMAQGAKPGEGGELPGHKVVGEIAVTRNSTAGVGLISPPPHHDIYSIEDLAQLIHDLKNANPSARISVKLVSEVGVGIIASGVVKGHADHVLISGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTVLQTDGQLKTGRDVAIAALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMVAEEMREIMSHLGFRTVNEMVGRSDMLEVDKEVIKSSQKLENIDLSLLLRPAAELRPEAAQYCVQKQDHSLDMALDNKLISLSDAALEKGLPVYIETPIYNVNRAVGTMLSHEVTKRYHLAGLPTDTIHIRFNGSAGQSFGAFLCPGVTLELEGDGNDYVGKGLSGGKVVVYPPNGSNFDPKENIVIGNVALYGATSGEAYFNGMAAERFCVRNSGAKAVVEGVGDHGCEYMTGGTVVVLGKTGRNFAAGMSGGIAYVLDIDDKFHSRCNHELVDLDKVEDEEDIMTLRMLIQQHQRHTNSELAKEVLANFENLLPKFIKVFPREYKRVLASMKAEAASKEAVEVAAKDAEEPDEGEPAEKDAFEELKKLAAASLNEKPSQAEQAEAPKRPSRVAHAVKHRGFVAYEREGVQYRDPNVRMNDWKEVMEESKPGPLLKTQSARCMDCGTPFCHQENSGCPLGNKIPEFNELVYQNRWREALDRLLETNNFPEFTGRVCPAPCEGSCVLGIIENPVSIKSIECAIIDKAFEEGWMVPRPPSKRTGNRVAVVGSGPAGLATADQLNKMGHTVTVYERADRIGGLMMYGVPNMKTDKVDVVQRRVNLMAEEGVNFVVNANVGVDPLYSLDRLREENDAIVLTVGATKPRDLPVPGREFSGVHFAMEFLHANTKSLLDSNLQDGNYISAKGKKVVVIGGGDTGTDCIGTSIRHGCSSVVNLELLPQPPQTRAPGNPWPQWPRIFRVDYGHQEAATKFGKDPRSYEVLTKRFVGDENGAVKGLEVIRVRWEKDETGKFQFKEVEGSEEIIEADLVLLAMGFLGPESTIAEKLGMERDNRSNFKADYGRFSTSVKGVFAAGDCRRGQSLVVWAISEGRQAAAQVDKYLGEEERDHNIDGNQEELIKRQQDLNKRHQDSSKHTVMT 2217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2758 2217 PRINTS Adrenodoxin reductase family signature 1844 1866 - -
Sto9g2758 2217 PRINTS Adrenodoxin reductase family signature 1867 1880 - -
Sto9g2758 2217 PRINTS Adrenodoxin reductase family signature 1910 1920 - -
Sto9g2758 2217 PRINTS Adrenodoxin reductase family signature 1988 2002 - -
Sto9g2758 2217 MobiDBLite consensus disorder prediction 1674 1693 - -
Sto9g2758 2217 Gene3D - 1370 1642 IPR036485 GO:0016491
Sto9g2758 2217 Gene3D - 1843 1951 - -
Sto9g2758 2217 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 91 2186 - -
Sto9g2758 2217 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 113 552 IPR029055 -
Sto9g2758 2217 CDD gltB_C 1374 1623 IPR002489 GO:0016491
Sto9g2758 2217 Pfam Glutamine amidotransferases class-II 113 540 IPR017932 -
Sto9g2758 2217 SUPERFAMILY FAD/NAD(P)-binding domain 1840 2180 IPR036188 -
Sto9g2758 2217 SUPERFAMILY Alpha subunit of glutamate synthase, C-terminal domain 1366 1630 IPR036485 GO:0016491
Sto9g2758 2217 PIRSF GOGAT 41 2209 IPR012220 GO:0005506|GO:0006537|GO:0010181|GO:0016040|GO:0050660
Sto9g2758 2217 TIGRFAM GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 1698 2182 IPR006005 GO:0006537|GO:0016639
Sto9g2758 2217 Gene3D Aldolase class I 566 929 IPR013785 -
Sto9g2758 2217 SUPERFAMILY alpha-helical ferredoxin 1696 1853 - -
Sto9g2758 2217 Gene3D - 1952 2113 IPR036188 -
Sto9g2758 2217 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 113 543 IPR029055 -
Sto9g2758 2217 PANTHER GLUTAMATE SYNTHASE 1 [NADH], CHLOROPLASTIC 91 2186 - -
Sto9g2758 2217 Pfam Pyridine nucleotide-disulphide oxidoreductase 1844 2169 IPR023753 GO:0016491
Sto9g2758 2217 Pfam Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 1719 1830 IPR028261 -
Sto9g2758 2217 SUPERFAMILY FMN-linked oxidoreductases 585 1348 - -
Sto9g2758 2217 Pfam Glutamate synthase central domain 590 878 IPR006982 GO:0006807|GO:0015930
Sto9g2758 2217 CDD GltS 113 535 - -
Sto9g2758 2217 CDD GltS_FMN 947 1326 IPR002932 GO:0006537|GO:0015930|GO:0016638
Sto9g2758 2217 Gene3D - 1681 1842 IPR009051 GO:0051536
Sto9g2758 2217 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 113 517 IPR017932 -
Sto9g2758 2217 Pfam GXGXG motif 1397 1583 IPR002489 GO:0016491
Sto9g2758 2217 Pfam Conserved region in glutamate synthase 945 1314 IPR002932 GO:0006537|GO:0015930|GO:0016638
Sto9g2758 2217 Gene3D Aldolase class I 930 1369 IPR013785 -
Sto9g2758 2217 MobiDBLite consensus disorder prediction 1035 1058 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2758 Sto-Chr9 29369173 29380495 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2758 K00264 - gmx:100809905 3841.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2758 9 29369173 29380495 Sto9g2758 9 29369173 29380495 ECH