Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto9g2731 | ATGGTTGAGTGGCAGTCACTCCTCCAGTCCATTTTTCTTGGTCTCATTTTCTCTTACCTCCTTGCTAAGCTCATATCCATCGtcgtatctttcaaggacgaaaatTTGACTGTAACTCGCAGCACCAGCACCGACCACAAAGGCAATCAGAGCAGGGTAGAACCTGATGACAACCCATTTCCGCCCAGGTCTGGTGCTGCTGATCAAGCCGAGCATCACGAGACTGAATCGATCATGGCCGAGCAGGGCAGTGTCAGAAATGAAAGTATAGACGGCGATGACGACTATGACGATGATTGGGAGGGAGTGGAAAGTACAGAATTGGATGAGGTCTTCAGTGCCGCAACGGCCTTCGTGGCTGCCGCCGCTGCTGATCGGCTATCGCAGAAAGTGTCCACTGATGTGCAGCTCCAGCTTTATGGGCTGTACAAAATTGCCACCGAAGGGCCGTGTAGTACGCCACAGCCGTCAGCACTGAAAATGACGGTTCGAGCCAAATGGCAAGCATGGCAGAAACTGGGTGCTATGCCTCCTGAAGATGCAATGCAGAAGTACATTGATATTGTGACAGAGCTATATCCTACTTGGTTAGATGGTTCTGCTTTGAGGAGCAAAAATAGAGATGGTGTTGGTTCAAGTTCAGAGTCTAAGGGACCGATGGGACCAGTATTCAGCACTTTTGTGTATGAAGAGGAAGCTGGCAGTGATTTAAAAATGGATGCAATTCATGGATATGCCAGAGAAGGAGACTCCACTAATCTGCTCAAGTGTATTGAAAATGGTGTTCCAGTGAATCTGAAGGACAGTGAGGGTCGGACACCATTACATTGGGCTGTGGATCGTGGTCACCTCAATGTCACCGAACTGCTTGTTAGTAAGAATGCTGATGTAAATGCCCAGGATGATGATGGGCAGACCCCATTGCATTATGCTgttgtgtgtgagagagaaggCATAGCTGAGTATTTAGTGAAGCACAATGCAGACACAGATTTGAAGGATAATGATGGCAGTTCCTCACGTGACATGTTGATTAGTGAGGTTTCGAAGACATACCTGTATCTCACCGCTGGTGGGAAACTAAATACGACGTTGAGGTTGACCCTTTTGTTCCCTTTGTTAGATAGACATTCAAAAGATGGTTTAGTTAGGTATGATGAGTTAGAGGCTTGGATCGTCCAACAAGCTCTGGAGAGATCCAATTATCTCACGCTTATAGAGATGGAgattcttccctttcttttggGGAGTATTTTCCTCACTTTTCTAATCAGGATATTTTTCTTGCACCCTGAAGACAGCAAGAATGAAGAAATGCTGAATTGGATTTTGCAAGATAGACTTAAGCGCATTAGTGATGGGAAATTCGAGTTAAGGGAATTTAAAGAGCATTTGTATGATAGGTATAAAAAATATGTGGCTTTTGAAACTGCTGGAGCTCCTGTGCCTGATGCACAACACAAGTTTGATGAACTTGACAAAAACAACGACCAATTCTTGTCAGTGGAAGAACTGAAACCCATCCTTCACTACCTTTACCCAGGAGAGATATCTTATGCTACATTGTACACAAGCTATTTAATGAACGAGGTTAGTTAG | 1599 | 0.4328 | MVEWQSLLQSIFLGLIFSYLLAKLISIVVSFKDENLTVTRSTSTDHKGNQSRVEPDDNPFPPRSGAADQAEHHETESIMAEQGSVRNESIDGDDDYDDDWEGVESTELDEVFSAATAFVAAAAADRLSQKVSTDVQLQLYGLYKIATEGPCSTPQPSALKMTVRAKWQAWQKLGAMPPEDAMQKYIDIVTELYPTWLDGSALRSKNRDGVGSSSESKGPMGPVFSTFVYEEEAGSDLKMDAIHGYAREGDSTNLLKCIENGVPVNLKDSEGRTPLHWAVDRGHLNVTELLVSKNADVNAQDDDGQTPLHYAVVCEREGIAEYLVKHNADTDLKDNDGSSSRDMLISEVSKTYLYLTAGGKLNTTLRLTLLFPLLDRHSKDGLVRYDELEAWIVQQALERSNYLTLIEMEILPFLLGSIFLTFLIRIFFLHPEDSKNEEMLNWILQDRLKRISDGKFELREFKEHLYDRYKKYVAFETAGAPVPDAQHKFDELDKNNDQFLSVEELKPILHYLYPGEISYATLYTSYLMNEVS | 532 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto9g2731 | 532 | MobiDBLite | consensus disorder prediction | 39 | 101 | - | - | |
| Sto9g2731 | 532 | Gene3D | - | 364 | 520 | - | - | |
| Sto9g2731 | 532 | PRINTS | Ankyrin repeat signature | 271 | 286 | IPR002110 | GO:0005515 | |
| Sto9g2731 | 532 | PRINTS | Ankyrin repeat signature | 319 | 333 | IPR002110 | GO:0005515 | |
| Sto9g2731 | 532 | ProSiteProfiles | Acyl-CoA-binding (ACB) domain profile. | 108 | 198 | IPR000582 | GO:0000062 | |
| Sto9g2731 | 532 | SUPERFAMILY | Ankyrin repeat | 239 | 343 | IPR036770 | - | |
| Sto9g2731 | 532 | ProSiteProfiles | Ankyrin repeat region circular profile. | 270 | 302 | - | - | |
| Sto9g2731 | 532 | SUPERFAMILY | Acyl-CoA binding protein | 107 | 197 | IPR035984 | GO:0000062 | |
| Sto9g2731 | 532 | PRINTS | Acyl-coA-binding protein signature | 131 | 149 | IPR000582 | GO:0000062 | |
| Sto9g2731 | 532 | PRINTS | Acyl-coA-binding protein signature | 154 | 169 | IPR000582 | GO:0000062 | |
| Sto9g2731 | 532 | PRINTS | Acyl-coA-binding protein signature | 175 | 192 | IPR000582 | GO:0000062 | |
| Sto9g2731 | 532 | Gene3D | - | 229 | 353 | IPR036770 | - | |
| Sto9g2731 | 532 | Pfam | Acyl CoA binding protein | 109 | 189 | IPR000582 | GO:0000062 | |
| Sto9g2731 | 532 | Pfam | Ankyrin repeats (3 copies) | 243 | 334 | IPR002110 | GO:0005515 | |
| Sto9g2731 | 532 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 480 | 515 | IPR002048 | GO:0005509 | |
| Sto9g2731 | 532 | ProSiteProfiles | Ankyrin repeat profile. | 303 | 335 | IPR002110 | GO:0005515 | |
| Sto9g2731 | 532 | PANTHER | ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6 | 1 | 347 | - | - | |
| Sto9g2731 | 532 | ProSiteProfiles | Ankyrin repeat profile. | 270 | 302 | IPR002110 | GO:0005515 | |
| Sto9g2731 | 532 | ProSiteProfiles | Ankyrin repeat region circular profile. | 303 | 335 | - | - | |
| Sto9g2731 | 532 | PANTHER | ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 2 | 1 | 347 | - | - | |
| Sto9g2731 | 532 | SUPERFAMILY | EF-hand | 366 | 512 | IPR011992 | - | |
| Sto9g2731 | 532 | SMART | ANK_2a | 303 | 332 | IPR002110 | GO:0005515 | |
| Sto9g2731 | 532 | SMART | ANK_2a | 270 | 299 | IPR002110 | GO:0005515 | |
| Sto9g2731 | 532 | SMART | ANK_2a | 237 | 266 | IPR002110 | GO:0005515 | |
| Sto9g2731 | 532 | Gene3D | - | 102 | 214 | IPR014352 | - | |
| Sto9g2731 | 532 | ProSitePatterns | EF-hand calcium-binding domain. | 493 | 505 | IPR018247 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto9g2731 | Sto-Chr9 | 29163250 | 29169313 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sto9g2731 | 1 | 349 | Acyl Lipid Metabolism Gene Families | AT5G53470 | 65.143 | 1.58e-144 | 417 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto9g2731 | - | - | cam:101491997 | 520.776 |
Event-related genes