Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2720 ATGTCCGACGCTTATTGGAGATACAGCGACTCACGGCAGATGCCGTCCTCGGCGATGCCTTCGATCGCCGGCAAGCGCTCGCGTTCCGACTATGATGTCTCTGGTGTTCATGACTTGGCCAATTACTTTCCCCGTGATGATGATAGAGGAGGGCTTCGAGTAATTAGAGATACGGAATCCCTTGAAGCATCGTATGAGCGTTACCTTCATAGTGCGCAAGTTTCCTCTTATGGTGCTGGAGCTGGACAGTCTACTAGAACCATTGGTGGGGTGCTTTCCAATCGTCCTGTTGATGATTCATATGTCCATAGTATTGGGGGAGTGGACCCAGCAACAACTGCAAAAGACAAGACCCTGGGATTAAGTGGTGGAAGGGCTGAGCGTCTGCTTCCGCCTGATGCTACAAATACACTGTTTGTGGAGGGTTTACCTCCCAACTGTACCAGACGGGAAGTAGCTCGTATCCTTTTATCTGACATCTTTCGTCCTTTTGTTGGCTACAAAGAAGTCAGACTTGTTAGCAAGGAATCAAGACAACCTGGGGGTGATCCACTGGTACTCTGTTTTGTGGACTTTGCAAGTCCAGCCCATGCAGCAACTGCTATGGATGCCCTGCAGGGTTACAAATTTGACGAGCTTGACCGCAACTCGGTCAATTTAAGGTTCCAATTTGCTCGCTATCCTGGTGCAAGGTCAGGTGGCGGGCATCGTGGCAAGCGTTGA 723 0.5021 MSDAYWRYSDSRQMPSSAMPSIAGKRSRSDYDVSGVHDLANYFPRDDDRGGLRVIRDTESLEASYERYLHSAQVSSYGAGAGQSTRTIGGVLSNRPVDDSYVHSIGGVDPATTAKDKTLGLSGGRAERLLPPDATNTLFVEGLPPNCTRREVARILLSDIFRPFVGYKEVRLVSKESRQPGGDPLVLCFVDFASPAHAATAMDALQGYKFDELDRNSVNLRFQFARYPGARSGGGHRGKR 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2720 240 Gene3D - 132 231 IPR012677 -
Sto9g2720 240 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 138 211 IPR000504 GO:0003723
Sto9g2720 240 SUPERFAMILY RNA-binding domain, RBD 124 231 IPR035979 GO:0003676
Sto9g2720 240 SMART rrm1_1 137 216 IPR000504 GO:0003723
Sto9g2720 240 MobiDBLite consensus disorder prediction 1 27 - -
Sto9g2720 240 CDD RRM_RBPMS_like 136 221 - -
Sto9g2720 240 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B 17 240 - -
Sto9g2720 240 PANTHER PROTEIN MATERNALLY EXPRESSED GENE 5 17 240 - -
Sto9g2720 240 MobiDBLite consensus disorder prediction 1 23 - -
Sto9g2720 240 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 136 227 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2720 Sto-Chr9 29101001 29106002 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2720 - - gmx:100800440 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2720 9 29101001 29106002 Sto9g2720 9 29101001 29106002 ECH