Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2681 ATGGCTAATCCTCTCTCATCCACCTTCCACGCCTCTTATCTTCCGCCAtcttcaccatcatcatcttcttcctcttccactGTCTGTTTGCCTAGTTCAGCTCATTTCTTGAGGCCATTTCCAAAGCACACAACATTTTTCTGCCCACCTGAAATGCTCAAATACACTGCTATTCCAtccagaagcagaagaagccCTGGAATTGTTCGTATGTCCTGGGACGGGCCACTCTCTTCCGTCAAATTGATCACACAGGGAAAAAATGTAGAGTTGACGGATAAGGTGAAGGAGCATGTGGAGGAGAAGGTAGGGAAGGCAGTTCAGAACCATAGTCACTTGGTTAGGGAGGTGGATGTGAGGTTATCCATCCGAGGAGGAGGAGAGTTTGGGAAAGGACCCAGGACCAGAAGATGTGAGGTAACTTTGTTCACCAAGAAGCATGGAGTGGTAAGGGCTGAGGAAGAAGCAGAGACTATATATGCGAGTATAGATTTGGTATCTTCTGTTATTCAGAGAAAGCTGAGGAAGATCAAGGAAAAGGTGTCTGATCATGGTCGCCACATGAAGGGCTTCAATAGGTTGAAGGTCAGGGAGCCTGTAACTCAGCCACCCTACGATGAGACATTCATAGAGACACAAACACAGATAGATACTCCtcccaaacaagaggaagaagaaCTCATAGATGAGGTTGTGCGCACCAAATACTTTGACATGCCACCATTGACAGTAGCTGAAGCAATTGAGCAGCTCGAAAATGTTGATCATGACTTCTATGGTTTTCGGAATGAAGAAACTGGGGTGATCAACATTGTGTACAGAAGAAAAGAAGGAGGTTATGGACTCATCATACCCAAAGGGGATGGTAAAGCTGAGAAAGTGGAGCCTGTGGTGGTTGAACCAGCAAAAGAACCATCCCTTGCAGAATGA 930 0.4237 MANPLSSTFHASYLPPSSPSSSSSSSTVCLPSSAHFLRPFPKHTTFFCPPEMLKYTAIPSRSRRSPGIVRMSWDGPLSSVKLITQGKNVELTDKVKEHVEEKVGKAVQNHSHLVREVDVRLSIRGGGEFGKGPRTRRCEVTLFTKKHGVVRAEEEAETIYASIDLVSSVIQRKLRKIKEKVSDHGRHMKGFNRLKVREPVTQPPYDETFIETQTQIDTPPKQEEEELIDEVVRTKYFDMPPLTVAEAIEQLENVDHDFYGFRNEETGVINIVYRRKEGGYGLIIPKGDGKAEKVEPVVVEPAKEPSLAE 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2681 309 CDD RaiA 81 180 IPR003489 GO:0044238
Sto9g2681 309 Pfam Sigma 54 modulation/S30EA ribosomal protein C terminus 229 282 IPR032528 -
Sto9g2681 309 Gene3D - 241 291 IPR038416 -
Sto9g2681 309 Gene3D - 81 185 IPR036567 -
Sto9g2681 309 PANTHER 30S RIBOSOMAL PROTEIN 68 289 - -
Sto9g2681 309 Pfam Sigma 54 modulation protein / S30EA ribosomal protein 83 181 IPR003489 GO:0044238
Sto9g2681 309 PANTHER 30S RIBOSOMAL PROTEIN 68 289 - -
Sto9g2681 309 Hamap Ribosome hibernation promoting factor [hpf]. 80 286 IPR034694 -
Sto9g2681 309 TIGRFAM yfiA: ribosomal subunit interface protein 82 185 IPR003489 GO:0044238
Sto9g2681 309 SUPERFAMILY Ribosome binding protein Y (YfiA homologue) 82 187 IPR036567 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2681 - - gmx:100784915 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2681 9 28902445 28904031 Sto9g2681 9 28902445 28904031 ECH