Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2653 ATGGCATCTTGGAACTTCCATTGTTTCCTCCTTCTTATCTTCACATTCTCAACCTGTTCTTACTCTAACACTTTCACCGTAACAAACAACTGCACACACACCATATGGCCCGGCACACTCTCCGGTTCAGGCTCGGCGATGCTTTCGTCGACCGGGTTCCGGCTGGACCCGGGCCAAAGTCAGAAACTGACGAGTGATCCAAAATGGTCAGGGAGGATATGGGGAAGGACAGGTTGCAAATTTGATGGAACAGGATCAGGGAAGTGTCAAACAGGTGACTGTGGGGGAAAGCTAGAATGTGAAGGGAGTGGAGCTACTCCACCTGCGTCTCTGTTTGAGATCACTCTTGGTGGATATGGTGGGCAAGACTTCTATGATGTGAGCTTGGTGGATGGCTACAATTTGCCCATTCTTGTTGTACCAAGGAGGGTGTATGGTGCTTCTGCTTGTAATTCCACTGGTTGTATTTCTGATCTCAATAAAGATTGCCCTAAAGAACTTCAAATTCGTGGAAATGGAAACCAAGGTGGTGGTGGTGTAGTAGGGTGTAGGAGTGCTTGCGAGGCATTTGGTTCGGAACAGTACTGCTGTAGCGGACAATTTAACACCCCAACCACATGTGGTCCATCCAACTATTCAACTATCTTCAAGAAGGCTTGTCCAAGAGCTTATAGCTACGCATATGATGATAAAACCAGCACTTTCACTTGCAGAgcttatgaatatcaaattaTCTTCTGTCCCAGGCATAAAAAGAGTTCATCTTCATCAAATAAAGGAAAGGATCAGCAAGTGGCATCTGTAAGAATTGATGAACGAGAGAGGAAAGAAGGATTTCATGAGTTCCTCAAAGGGAGAGGAAAGGACAAAAATGGTCCTGTCAAGCAGATAGAAATGATGAACGTCTAA 909 0.4488 MASWNFHCFLLLIFTFSTCSYSNTFTVTNNCTHTIWPGTLSGSGSAMLSSTGFRLDPGQSQKLTSDPKWSGRIWGRTGCKFDGTGSGKCQTGDCGGKLECEGSGATPPASLFEITLGGYGGQDFYDVSLVDGYNLPILVVPRRVYGASACNSTGCISDLNKDCPKELQIRGNGNQGGGGVVGCRSACEAFGSEQYCCSGQFNTPTTCGPSNYSTIFKKACPRAYSYAYDDKTSTFTCRAYEYQIIFCPRHKKSSSSSNKGKDQQVASVRIDERERKEGFHEFLKGRGKDKNGPVKQIEMMNV 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2653 302 Pfam Thaumatin family 29 248 IPR001938 -
Sto9g2653 302 SMART tha2 25 248 IPR001938 -
Sto9g2653 302 PRINTS Pathogenesis-related protein signature 24 36 IPR001938 -
Sto9g2653 302 PRINTS Pathogenesis-related protein signature 72 83 IPR001938 -
Sto9g2653 302 PRINTS Pathogenesis-related protein signature 85 114 IPR001938 -
Sto9g2653 302 PRINTS Pathogenesis-related protein signature 123 139 IPR001938 -
Sto9g2653 302 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
Sto9g2653 302 MobiDBLite consensus disorder prediction 265 293 - -
Sto9g2653 302 PIRSF PR5 1 284 IPR001938 -
Sto9g2653 302 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 8 265 - -
Sto9g2653 302 MobiDBLite consensus disorder prediction 251 302 - -
Sto9g2653 302 PANTHER OS03G0233200 PROTEIN 8 265 IPR001938 -
Sto9g2653 302 ProSitePatterns Thaumatin family signature. 85 100 IPR017949 -
Sto9g2653 302 SUPERFAMILY Osmotin, thaumatin-like protein 24 249 IPR037176 -
Sto9g2653 302 Gene3D Thaumatin 23 248 IPR037176 -
Sto9g2653 302 ProSiteProfiles Thaumatin family profile. 22 250 IPR001938 -
Sto9g2653 302 CDD TLP-PA 24 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2653 Sto-Chr9 28757064 28759101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2653 9 259 Receptor kinase-like Gene Family AT5G38280 45.850 5.16e-76 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2653 - - adu:107458466 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2653 9 28757064 28759101 Sto9g2653 9 28757064 28759101 ECH