Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2358 ATGGCATTCGAGAAGATCAAGGTGGCCAACCCAATCGTGGAGATGGATGGAGATGAAATGACTCGAGTTATCTGGAAGTCAATCAAGGATAAGCTCATTCTCCCCTTTCTTGAGTTGGACATCAAGTATTTTGATCTAGGCCTTCCTTACCGTGATCAGACTGACGATAAAGTTACTGTTGAAAGTGCAGAAGCTACTCTAAAGTATAATGTAGCCATCAAGTGTGCAACTATCACACCAGATGAAGCTCGGGTGAAGGAATTTGGCCTGAAGCAAATGTGGAAGAGTCCAAATGGCACAATTAGGAACATTTTGAATGGAACTGTCTTCAGAGAACCAATTCTTTGCAAAAACATTCCTCGCCTTGTTCCAGGCTGGACAAAGGCAATATGTATTGGAAGGCATGCGTTTGGCGACCAATATCGGGCTACCGACACAGTTATTAAGGGTCCTGGACAACTAAAGCTAGTATTTGTACCAGAAGGGCAAGATCAGAAGACTGAACTAGAGGTTTATAACTTCACTGGTGAAGGGGGTGTTTCATTAGCCATGTACAACACTGATGAGTCTATCCGTGCATTTGCAGAGGCTTCCATGACAACTGCTTATGAGAAAAAATGGCCTTTATATCTTAGCACAAAAAATACAATTCTTAAGAAGTATGATGGAAGATTTAAGGACATTTTCCAAGAAGTTTATGAGGCTAGCTGGAAATCCAAATTTGAGGCTGCTGGTATATGGTATGAGCACCGGCTTATTGATGATATGGTTGCCTATGCTCTCAAGAGTGAAGGAGGTTATGTATGGGCATGCAAAAACTATGATGGAGATGTCCAGAGTGACTTCTTAGCTCAAGgttttgggtcaCTGGGTTTGATGACATCTGTACTGGTGTGCCCTGATGGAAAGACCATAGAAGCAGAAGCTGCCCATGGTACAGTTACTCGCCATTTTAGGGTTCATCAAAAGGGAGGGGAAACCAGCACAAACAGCATAGCATCCATCTTTGCATGGACAAGAGGCCTAGCCCACAGGGCAAAGCTGGATGACAATGCTAAGCTCTTGGATTTCACTCAAAAACTAGAGGCTGCTTGCATTGGAGCAGTAGAATCTGGGAAGATGACCAAGGATTTGGCACTTATTATTCATGGATCCAAGCTTTCTAGGGAGCATTATTTGAACACCGAGGAGTTCATTGAAGCTGTGGCAGATGAGCTTAAAATAAAACTCTCTGTCAAGGCCTGA 1245 0.4289 MAFEKIKVANPIVEMDGDEMTRVIWKSIKDKLILPFLELDIKYFDLGLPYRDQTDDKVTVESAEATLKYNVAIKCATITPDEARVKEFGLKQMWKSPNGTIRNILNGTVFREPILCKNIPRLVPGWTKAICIGRHAFGDQYRATDTVIKGPGQLKLVFVPEGQDQKTELEVYNFTGEGGVSLAMYNTDESIRAFAEASMTTAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEASWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNAKLLDFTQKLEAACIGAVESGKMTKDLALIIHGSKLSREHYLNTEEFIEAVADELKIKLSVKA 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2358 414 TIGRFAM nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 5 411 IPR004790 GO:0004450|GO:0006102
Sto9g2358 414 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 3 409 - -
Sto9g2358 414 PANTHER NADP-SPECIFIC ISOCITRATE DEHYDROGENASE 2 411 IPR004790 GO:0004450|GO:0006102
Sto9g2358 414 PANTHER ISOCITRATE DEHYDROGENASE [NADP] 2 411 - -
Sto9g2358 414 SMART Iso_dh_2 11 402 IPR024084 -
Sto9g2358 414 ProSitePatterns Isocitrate and isopropylmalate dehydrogenases signature. 273 292 IPR019818 GO:0000287|GO:0016616|GO:0051287
Sto9g2358 414 Gene3D Isopropylmalate Dehydrogenase 3 413 - -
Sto9g2358 414 PIRSF IDH_NADP 1 413 IPR004790 GO:0004450|GO:0006102
Sto9g2358 414 Pfam Isocitrate/isopropylmalate dehydrogenase 7 402 IPR024084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2358 Sto-Chr9 26815472 26819359 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2358 K00031 - gmx:100791166 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2358 9 26815472 26819359 Sto9g2358 9 26815472 26819359 ECH