Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2352 ATGGCTTCTACATTATCATTAAAGCGCTCAGATTCTATAACGGATAACATGCCAGATGCGTTGAGGCAGAGTCGATACCACATGAAAAGGTGTTTCGCTAGGTACCTAGAGAGAGGCAGAAGGATCATGAAACTTCAACATTTAATGGAAGAAATGGAGCAGGTTATAGATGACATACATGAAAGAAACGAAGTGATGGAGGGCATGCTTGGCTTCATTTTGAAATCCACACAGGAAGCTGTCGTTAATCCACCATATGTGGCCTTTGCTGTGAGGCCAAATCCTGGATTTTGGGAATTTGTTAAAGTGAGCTCCTTAGATCTCTCTGTTGAGGGCATCTCCTCCATTGATTACCTGAAATTCAAAGAAATGATATATGACGAAAAGTGGGCAAATGATGAAAACGCATTGGAAGCAGATTTTAGATCGTTTGACAGCAAAGTTCCTCATTTAGCTCTGCCTTCTTCAATTGGAAATGGACTCAGATTTGTTTCTAAAGTTTTATCTTCGAAGTTGAGTGGAAAATTGGCAAAAATACAGACCCTAGTTAACTACTTGTTAACACTGAACTGCCGGGGAGAAAATTTAATGATAAATGAGACACTGGCTTCTGCTGAAAGGCTTCAGCTGGCACTAATAGTGGCTGATGCATTCCTTTCAGCACTTCCTAAGGACACTCCATATGATAATTTTGAGCTAAGGTTCAAAGAGTGGGGTTTTGAGAGAGGCTGGGGAGATACAGCAGAAAGAGTGAGGGAGACAATGAGAACTCTATCAGAAGCACTCCAAGCACCAGACCCAGTGAATCTGGAAATGTTTTTTAGCCGAATTCCTACTATATTCAATGTTGTGATATTCTCTGTTCATGGTTACTTTGGCCAAGCGGATGTCCTTGGCTTGCCAGACACAGGAGGACAGGTAGTTTACATATTGGATCAAGTTAGAGCTCTGGAAGAAGAATTGCTCCTAAGAATTAAGCAACAGGGGTTAAATATGAAGCCTAACATTCTTGTGGTTACAAGGCTCATACCAGAAGCTCGGGGAACCAAGTGCAACCAGGAGTTGGAACCTATAATTGATACCAAGCACTCCTTCATTCTACGTGTGCCTTTTCAGACAGAAAAGGGGATCATGCGTCAGTGGGTTTCTCGCTTTGACATTTATCCCTATCTTGAGAGATTTACTCAAGATGCTACAGTTAAGATTCTGGACCTAATGGAAGGACCACCAGATCTTATTCTAGGAAATTACACTGATGGAAATTTGGTGGCATCTCTGATGGCCAATAAACTTGGGGTAACTCTGGGGACTATAGCACATGCTTTAGAAAAGACTAAGTATGAAGATTCTGATGTCAAGTGGAAGGAGTTTGATGGCAAGTATCATTTCTCGTGCCAATTCATGGCCGATACAGTTGCTATGAATGCAGCAGATTTCATCATAACCAGCACATACCAAGAGATTGCTGGAAGCAAAGTTAGACCTGGGCAATATGAGAGTCATGCTGCATTTACGCTCCCAGGACTGTGCAGGGTTGTTTCAGGAATAAACGTATTTGATCCCAAGTTCAACATAGCTGCACCCGGAGCTGATCAGTCTGTCTATTTCCCTCACACAGAGAAAGACAGAAGACTAACTCAATTTCACCCTGCCATTGAAAACCTGTTGTATGGTAAAGTGGAGAACAATGAGTATATTGGGTACCTAAATGACAGGAGAAAACCCATCATCTTCTCAATGGCAAGGCTTGATGCTGTGAAGAACCTAACTGGGCTACTTGAGTGGTACGGGAAGAACAGGAGACTAAGAGGCTTGGTGAACCTTGTCATAGTTGGAGGCTTCTTTGACCCTTTGAAATCCAAAGACAGGGAAGAAAGGGCAGAAATAACAAAAATGCTTGGTTTGATGGACAAATACCTACTAAGGGGCCAATTCAGATGGATTGCTGCACAAACTGATAGGCATCGCAATGGAGAACTCTACCGCTGCATCGCTGACACAAAGGGAGCTTTCGTTCAACCTGCCTTATACGAAGCATTTGGTCTCACTGTAATTGAAGCAATGAACTGTGGATTACCCACCTTCGCTACTAACCAAGGAGGTCCCGCAGAAATCATCGTCGATACGGTTTCTGGGTTTCTTATCGACCCCCTCAACGGGGACGAATCCAGCAATAGAATTGCCGACTTCTTTGAAAATTGCAAAGTAGATTCAATACATTGGAACAGGATTTCCGCGGCGGGATTACAGCGCATCAATGAATGCTATACTTGGAAGATCTATGCGAACAAATTGCTGAATATGGGAAGCATTTACACCTTGTGGAGGCAAGTGACTAAGGAGCAAAAAGAAGCGAAGCAGAGATACATACAGACGTTCCATAATCTTATATTCAAGAAATTGGTAACGACTGTACCTGTTCCGATTGATGAACCTCAACAAGCAGCGTTCAAGCAGCAGTCTGTCGCAGAACGACACGTTCTCAATCCAGATTTGATAGGTTTTTTCGATTTTAATGGTCTCAGCAACAAAGGAGGACGATTTAAGGAGAATCCTTCACTCTTAATATCTGTCTTTGCCTAA 2583 0.4262 MASTLSLKRSDSITDNMPDALRQSRYHMKRCFARYLERGRRIMKLQHLMEEMEQVIDDIHERNEVMEGMLGFILKSTQEAVVNPPYVAFAVRPNPGFWEFVKVSSLDLSVEGISSIDYLKFKEMIYDEKWANDENALEADFRSFDSKVPHLALPSSIGNGLRFVSKVLSSKLSGKLAKIQTLVNYLLTLNCRGENLMINETLASAERLQLALIVADAFLSALPKDTPYDNFELRFKEWGFERGWGDTAERVRETMRTLSEALQAPDPVNLEMFFSRIPTIFNVVIFSVHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLLRIKQQGLNMKPNILVVTRLIPEARGTKCNQELEPIIDTKHSFILRVPFQTEKGIMRQWVSRFDIYPYLERFTQDATVKILDLMEGPPDLILGNYTDGNLVASLMANKLGVTLGTIAHALEKTKYEDSDVKWKEFDGKYHFSCQFMADTVAMNAADFIITSTYQEIAGSKVRPGQYESHAAFTLPGLCRVVSGINVFDPKFNIAAPGADQSVYFPHTEKDRRLTQFHPAIENLLYGKVENNEYIGYLNDRRKPIIFSMARLDAVKNLTGLLEWYGKNRRLRGLVNLVIVGGFFDPLKSKDREERAEITKMLGLMDKYLLRGQFRWIAAQTDRHRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDTVSGFLIDPLNGDESSNRIADFFENCKVDSIHWNRISAAGLQRINECYTWKIYANKLLNMGSIYTLWRQVTKEQKEAKQRYIQTFHNLIFKKLVTTVPVPIDEPQQAAFKQQSVAERHVLNPDLIGFFDFNGLSNKGGRFKENPSLLISVFA 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2352 860 PANTHER SUCROSE SYNTHASE 1 824 - -
Sto9g2352 860 Gene3D Glycogen Phosphorylase B; 284 801 - -
Sto9g2352 860 Gene3D - 11 149 - -
Sto9g2352 860 PANTHER - 1 824 IPR012820 GO:0005985|GO:0016157
Sto9g2352 860 Pfam Glycosyl transferases group 1 571 733 IPR001296 GO:0016757
Sto9g2352 860 Coils Coil 42 69 - -
Sto9g2352 860 Gene3D Glycogen Phosphorylase B; 531 758 - -
Sto9g2352 860 Pfam Sucrose synthase 9 557 IPR000368 GO:0005985|GO:0016157
Sto9g2352 860 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 300 767 - -
Sto9g2352 860 Gene3D - 150 279 - -
Sto9g2352 860 TIGRFAM sucr_synth: sucrose synthase 26 806 IPR012820 GO:0005985|GO:0016157
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2352 Sto-Chr9 26751900 26756628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2352 7 811 Glycosyltransferase AT4G02280 56.522 0.0 947
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2352 K00695 - gmx:100808482 1360.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2352 9 26751900 26756628 Sto9g2352 9 26751900 26756628 ECH