Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2135 ATGTCAGCTTTGGATTATCTATCACCGTTAACTCACAGCAAACTTTATCTAAATTCGAATTCGAATTTCTATCATTGGCATGGAGGGGGATTTTTCCTTCAGAAATCGAGGGTTTTCCGCAGGAATTCGAGGCATTTCGTTCTGAATTCGGCGTCGGTTCCGCCCATTAGAGCTCACAGGCAAGGGAATTTGTCGAGGGATTCGGGGAGGTTAAATTTGTGGGGAGGTTTCGTGAGGAACTATGGACTCAGAAAGGGTTGTTGTTGTGTTAGAGCTAGCGGTCAGGAGAGCGATTCGACGGCGTCGGGTTCGGGTGAGAAGAGTGAAGCAGCGAAAGCCAGCGAGGGTCAAGGGGTTAATAAGAATTCGCCGAGTTCTGGTTCGAACAGAAGGAGGGAGAAGCAGGGAAAAGGTGGATGGTGGTGGAGTTCGAAGGGAGGGAAGTGGCGATGGCAGCCTATAGTGCAGGCGCAGGAAATTGGCGTTTTGCTTTTGCAATTGGGGATTGTGATTTTCGTTATGCGGTTACTTCGTCCAGGGGTTCCATTACCCGGGTCTGAGCCGAGGACTCCAACTACGTTTGTTAGTGTGCCGTACAGCGAGTTCTTGAGTAAAATCAACAGTAATCAAGTACAGAAGGTGGAGGTTGATGGAGTCCATATCATGTTCAAATTGAAGTCTGATATAGGAACCATTCAGGATCGTGAAGTTGCGGGAACAAGTAGGTTGCAGGAGTCAGAGTCGTTGGTTAAGAGTGTTGCTCCAACAAAGAGGATAATTTACACAACAACAAGGCCAAGTGACATAAAAACCCCATATGAAAAGATGTTAGAAAATGAAGTGGAGTTTGGGTCACCAGATAAGCGTTCTGGTGGATTCTTTAACTCTGCTCTGATAGCCTTGTTTTATGTTGCTGTGCTCGCTGGACTTCTACATCGATTCCCTGTGAGCTTTTCTCAGCATACAGCTGGTCAGATTAGGAACCGCAAATCAGGCACTTCTACTGGTGCAAAGTCATCTGATCAAGGTGACACAATTACTTTTGCTGATGTTGCTGGTGTTGATGAAGCTAAGGAAGAGTTAGAAGAGATTGTGGAATTTCTTCGGAATCCAGACAGGTATATTCGACTTGGTGCTCGTCCTCCTCGGGGTGTTCTTTTGGTGGGTCTTCCTGGAACAGGTAAGACTCTACTAGCAAAGGCTGTGGCGGGGGAAGCTGATGTGCCATTTATAAGTTGTTCTGCTAGTGAGTTTGTGGAATTATATGTTGGCATGGGTGCCTCCCGTGTAAGAGATCTCTTTGCACGGGCAAAGAAGGAAGCACCATCCATAATATTTATTGATGAGATAGATGCTGTGGCTAAAAGCCGTGATGGCAAATTTCGTATTGTGAGCAACGATGAGAGAGAGCAAACCTTGAATCAGTTACTCACTGAGATGGATGGATTTGACAGCAATTCTGCAGTGATTGTTCTTGGTGCGACTAATCGCTCAGATGTCTTAGATCCCGCACTTCGCCGACCAGGAAGATTTGATCGTGTAGTTATGGTGGAAACACCTGACAGGAATGGAAGAGAATCCATCTTAAAAGTTCATGCTTCCAAGAAAGAACTTCCTTTAGCCAAAGATGTTAACCTTGGGGACATTGCTTCTATGACTACTGGTTTCACTGGAGCAGATCTTGCAAACCTTGTAAATGAAGCTGCTTTACTGGCTGGAAGACAAAACAAAATTGTTGTGGAGAAAATTGATTTTGTTCAAGCTGTGGAGAGATCAATAGCTGGCATTGAGAAGAAGACTGCCAAATTGCAGGGAAGTGAGAAGGCTGTAGTAGCCCGACACGAAGCCGGTCATGCCGTTGTAGGTACTGCAGTTGCAAATCTTCTTCCTGGACAGCCACGTGTTGAGATCATGGTTTTCTGTTTGAATACTTACAATAGTAAGTATAACCCTTTAGTATTTGCACCTACACTACCCTTGCAATACATAAGCTCTGCCTTTGAGAAACTAAGCATATTGCCAAGGTCAGGAGGGGCTTTGGGCTTTACTTATATTCCTCCAACAACTGAGGATAGATATTTGTTATTCATTGATGAGTTACGTGGTCGTCTAGTTACACTTCTTGGAGGACGTGCTGCAGAAGAAGTTGTTTACTCAGGTCGAGTGTCGACAGGTGCACTTGATGACATACGGCGAGCAACTGACATGGCATACAAGGCAGTGGCTGAATATGGTCTTAATCAGACCATAGGCCCTGTATCAATAGCCACTCTTTCTAATGGTGGAATTGATGAGTCTGGAGGAGCAGTTCCTTGGGGAAGGGATCAGGGTCAACTTATTGATTTGGTTCAAAGAGAGGTGAAATTGTTGCTGCAGTCTTCTCTGGACATGGCACTTTCCATTGTGCGAGCTAATCCTACTGTTTTGGAGGGTCTAGGTGCTCAATTGGAAGAAAATGAGAAAGTAGAGGGTGAAGAGCTACAGAAATGGCTAAGACTTGTGGTTGCACCAACAGAACTTGCACTCTTTGTCAAAGGAAAGCAAGAGACTCTTCTCCCCTTGCAGAGACAGGTTCCTGAAAAGGTTTAG 2589 0.4527 MSALDYLSPLTHSKLYLNSNSNFYHWHGGGFFLQKSRVFRRNSRHFVLNSASVPPIRAHRQGNLSRDSGRLNLWGGFVRNYGLRKGCCCVRASGQESDSTASGSGEKSEAAKASEGQGVNKNSPSSGSNRRREKQGKGGWWWSSKGGKWRWQPIVQAQEIGVLLLQLGIVIFVMRLLRPGVPLPGSEPRTPTTFVSVPYSEFLSKINSNQVQKVEVDGVHIMFKLKSDIGTIQDREVAGTSRLQESESLVKSVAPTKRIIYTTTRPSDIKTPYEKMLENEVEFGSPDKRSGGFFNSALIALFYVAVLAGLLHRFPVSFSQHTAGQIRNRKSGTSTGAKSSDQGDTITFADVAGVDEAKEELEEIVEFLRNPDRYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEADVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDRNGRESILKVHASKKELPLAKDVNLGDIASMTTGFTGADLANLVNEAALLAGRQNKIVVEKIDFVQAVERSIAGIEKKTAKLQGSEKAVVARHEAGHAVVGTAVANLLPGQPRVEIMVFCLNTYNSKYNPLVFAPTLPLQYISSAFEKLSILPRSGGALGFTYIPPTTEDRYLLFIDELRGRLVTLLGGRAAEEVVYSGRVSTGALDDIRRATDMAYKAVAEYGLNQTIGPVSIATLSNGGIDESGGAVPWGRDQGQLIDLVQREVKLLLQSSLDMALSIVRANPTVLEGLGAQLEENEKVEGEELQKWLRLVVAPTELALFVKGKQETLLPLQRQVPEKV 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2135 862 Gene3D Peptidase M41 597 834 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Sto9g2135 862 MobiDBLite consensus disorder prediction 94 141 - -
Sto9g2135 862 Pfam Peptidase family M41 666 829 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Sto9g2135 862 Gene3D - 326 518 IPR027417 -
Sto9g2135 862 ProSitePatterns AAA-protein family signature. 489 507 IPR003960 GO:0005524|GO:0016887
Sto9g2135 862 CDD AAA 352 518 - -
Sto9g2135 862 Pfam FtsH Extracellular 164 246 IPR011546 GO:0004176|GO:0004222|GO:0005524|GO:0008270|GO:0016021
Sto9g2135 862 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 7, CHLOROPLASTIC 37 855 - -
Sto9g2135 862 Hamap ATP-dependent zinc metalloprotease FtsH [ftsH]. 37 861 IPR005936 GO:0004176|GO:0004222|GO:0016020
Sto9g2135 862 SMART AAA_5 381 521 IPR003593 -
Sto9g2135 862 Pfam ATPase family associated with various cellular activities (AAA) 385 518 IPR003959 GO:0005524|GO:0016887
Sto9g2135 862 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 346 591 IPR027417 -
Sto9g2135 862 Gene3D - 520 596 - -
Sto9g2135 862 SUPERFAMILY FtsH protease domain-like 605 832 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Sto9g2135 862 Pfam AAA+ lid domain 543 585 IPR041569 -
Sto9g2135 862 PANTHER METALLOPROTEASE M41 FTSH 37 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2135 Sto-Chr9 25103556 25109785 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2135 1 855 Miscellaneous Gene Families AT5G58870 70.785 0.0 1144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2135 K03798 - zju:107410840 1245.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2135 9 25103556 25109785 Sto9g2135 9 25103556 25109785 ECH