Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2063 ATGTTGCAGTTTATAGAGGGAGTTAAGCAGCTATGTGCTTCCTTATTGCGTTGCTGTGACCTTGAGCTATATAAGCAGCCAACAGGCATTGACGATCCCGAACTTCTTGCAAGGGAGACAGTTTTCAGTGTAAGTGAAATAGAAGCACTTTATGAGCTCTTTAAAAAGATTAGCAGTGCTGTGATTGACGATGGGCTGATTAATAAGGAGGAGTTTCAATTAGCATTATTCAAGACAAACAAAAAGGAGAGTTTATTTGCTGATCGGGTATTTGATTTGTTTGACACAAAGCACAATGGGATACTAGGTTTTGAAGAGTTTGCTCGAGCTCTATCCGTCTTCCATCCAAATGCCCCTATTGATGAAAAGATCGAATGTAAGTTAAAAGAATATTTGTTTTATGCAACCATTTCAGGTGTTTCAGTTTCCTTTCAACTGTATGATCTCAAGCAGCAAGGATTTATTGAAAGGCAGGAGGTGAAGCAAATGGTAGTAGCTACACTAGCTGAATCTGGCATGAACCTATCAGATGATGTTATAGAAAGTATAATTGACAAGACTTTTGAAGAAGCAGATACCAAGCATGATGGCAAGATTGACAAGGAGGAGTGGAGAAACCTTGTTTTGCGCCATCCGTCACTTTTGAAGAATATGACCCTTCAATATCTCAAGGACATCACCACAACTTTTCCGAGCTTTGTGTTCCATTCGCAAGTAAACGATACTTGA 729 0.3937 MLQFIEGVKQLCASLLRCCDLELYKQPTGIDDPELLARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDEKIECKLKEYLFYATISGVSVSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMTLQYLKDITTTFPSFVFHSQVNDT 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2063 242 PANTHER CALCINEURIN B 1 242 IPR045198 GO:0005509|GO:0019722|GO:0019900
Sto9g2063 242 Pfam EF hand 184 208 IPR002048 GO:0005509
Sto9g2063 242 ProSiteProfiles EF-hand calcium-binding domain profile. 135 170 IPR002048 GO:0005509
Sto9g2063 242 PANTHER CALCINEURIN B-LIKE PROTEIN 3 ISOFORM X2 1 242 - -
Sto9g2063 242 SUPERFAMILY EF-hand 33 234 IPR011992 -
Sto9g2063 242 SMART efh_1 86 114 IPR002048 GO:0005509
Sto9g2063 242 SMART efh_1 139 167 IPR002048 GO:0005509
Sto9g2063 242 SMART efh_1 183 211 IPR002048 GO:0005509
Sto9g2063 242 ProSiteProfiles EF-hand calcium-binding domain profile. 82 117 IPR002048 GO:0005509
Sto9g2063 242 ProSiteProfiles EF-hand calcium-binding domain profile. 179 214 IPR002048 GO:0005509
Sto9g2063 242 Pfam EF-hand domain pair 64 109 IPR002048 GO:0005509
Sto9g2063 242 Gene3D - 32 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2063 Sto-Chr9 24563296 24566656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2063 1 242 EF-hand Containing Proteins AT5G55990 83.471 1.16e-144 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2063 K06268 - fve:101301472 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2063 9 24563296 24566656 Sto9g2063 9 24563296 24566656 ECH