Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2048 ATGGGTATGGGTCATGATGAGGCAATCAAGCAGCTGGAAGCTCTTATGGAAAACGTGGATGAGCAGCAGAAGAAGTCGTTCCAGAATATGCACCAGGGCTATCCAACTGAAACATTGATACAGTTTCTCAAAGCAAGGGACTGGAATGTTGCCAAAGCCCATAAAATGATCTCTGGATGTATATACTATGCTGATGCTTTTAAACTCTTACAGTTGGTTGATTGTTTAAAATGGAGAGTTGACAACGAGATCGACAATGTTTTATCGAAACCAATCTCTGCTGATTTGTACAGAAATGTGCGAGATTCTCAACTCATAGGAATGTCTGGATACTCAAAGGAGGGTTTACCTGTCATTGCTATTGGTGTTGGGCTCAGCACATATGACAAAGCACCTGACAAATACTATGTACAATCACACATCCAAATGAACGAGTATAGAGATCGAGTGCCAACAGCTACAAAGAAACATGGCCGATACATAGGAACCTGCGTGAAAGTCTTAGATATGACTGGTTTAAGACTGTCAGCACTGAATCAATTGAGGCTTCTGACTGCTATATCTACCATAGATGACTTGAACTACCCAGAAAAGACAGACACATACTATATTGTTAACGCGCCATATGTATTCTCTGCATGTTGGAAGGTTGTAAAGCCTCTTTTGCAAGAAAGAACAAGGAGGAAGGTCCAGGTACTGCAAGGTTGTGGGAGGGATGAATTACTCAAGGTAATGGACTTTGCATCCCTTCCGCACTTCTGCAGAAAAGAGAGTTCAAAGTCATCTCGGCATAACGAAGCAGGAAGTACTGAAAACTGCTTCTCCTTGGACCATGCCTTCCATCAACAACTCTATAACTACATCAAGCGGCAAGCTGTGGCTATGGAGTCCATATCGCCACCAACCAGACAAGGATCTTTCTATGTAGAATTACCAGAGCCGGACCCAGATGATGCCAAAATTGCCAAGACCATAGAAACACAGTTCCACAAGTTGGAAAATCAGAATGCCCTCACAAACTCACTGGATGGTCTTGTAGTTAATGGTAATTGA 1053 0.4255 MGMGHDEAIKQLEALMENVDEQQKKSFQNMHQGYPTETLIQFLKARDWNVAKAHKMISGCIYYADAFKLLQLVDCLKWRVDNEIDNVLSKPISADLYRNVRDSQLIGMSGYSKEGLPVIAIGVGLSTYDKAPDKYYVQSHIQMNEYRDRVPTATKKHGRYIGTCVKVLDMTGLRLSALNQLRLLTAISTIDDLNYPEKTDTYYIVNAPYVFSACWKVVKPLLQERTRRKVQVLQGCGRDELLKVMDFASLPHFCRKESSKSSRHNEAGSTENCFSLDHAFHQQLYNYIKRQAVAMESISPPTRQGSFYVELPEPDPDDAKIAKTIETQFHKLENQNALTNSLDGLVVNGN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2048 350 Coils Coil 5 29 - -
Sto9g2048 350 CDD SEC14 97 253 IPR001251 -
Sto9g2048 350 Pfam CRAL/TRIO domain 104 253 IPR001251 -
Sto9g2048 350 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 93 251 IPR001251 -
Sto9g2048 350 SUPERFAMILY CRAL/TRIO domain 95 253 IPR036865 -
Sto9g2048 350 Pfam CRAL/TRIO, N-terminal domain 8 57 IPR011074 -
Sto9g2048 350 SUPERFAMILY CRAL/TRIO N-terminal domain 19 62 IPR036273 -
Sto9g2048 350 PANTHER OS09G0258000 PROTEIN 1 349 - -
Sto9g2048 350 PANTHER - 1 349 - -
Sto9g2048 350 SMART CRAL_TRIO_N_2 35 60 IPR011074 -
Sto9g2048 350 SMART sec14_4 100 259 IPR001251 -
Sto9g2048 350 Gene3D - 3 287 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2048 Sto-Chr9 24454985 24459336 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2048 1 343 Acyl Lipid Metabolism Gene Families AT5G47730 63.873 1.43e-158 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2048 - - gmx:100817955 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2048 9 24454985 24459336 Sto9g2048 9 24454985 24459336 ECH