Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2045 ATGACCCTAGGCAGTAGGCGTAGTAGCACAGTGGAATTAGagaaggaagatgatgaagctCCTTTGTTATTTGAGTCTAAGGAAGGAAAATGGGGTGGAGCTTACAAGCTATTCGCATGCACAATATttgcagGTATATGTATGATATTGGTTTATAGAGTGATGAAGATgccaaaaagaggagaagaaggaagatggGGTTGGATTGCTATGTTATGGGCAGAAGTGTGTTTTGGAGTGTATTGGATTTTCACTCAGTCTCTTCGTTGGACGCTTCTTTATCACATTCCTTTCGACCATAGGCTCTTCCAAAGATatggtgaaaacaaattaccaGGAGTGGACATTTTTGTGTGCACAGCAGATCCTATGTTGGAGCCTCCGAATATGGTGATAAACACAGTGTTATCAGTAATGTGTTACAATTATCCTTCAAATAAGTTAAGTGTTTATCTCTCTGATGATGGAGCCTCTGAACTCACCTTCTATGCTCTTCTCAAAGCTTCTATTTTCTCCAAGCATTGGATTCCTTTCTGTAAAAGATTCAACATTGAACCTAGGTCACCTGAGGCTTACTTTTCCCAACATTATTGTACCATTAAGAATACCCAAGAATGGTCTTCTATTAAGAAATTATATGAAGACATGAAAAGTGAGATAGAGTTAGTTGTGGAAAAGGGTAAGGTTCCAGATGAAATAAGGAAGCAACACAAAGGATTCTCAGAATGGAATTCCAAAACCACAAAGAAGGACCATCAATCCATTGTGCAGATCATAATTGATGGAAGGGACAGTAATGGTGTAGATGATGATGGATTTCAACTTCCAACTCTAGTTTATATGGCAAGAGAGAAGAGACCCAACTTTCCTCATCATTTTAAAGCAGGAGCAATGAATGCACTAATAAGGGTGTCATCAGAGATAAGCAATGCACCTATCATTCTCAACTTGGACTGTGACATGTACTCAAATAATGCAGATACCATTCAAGAAGTGTTGTGTTTCTTCATGGACCAAAGACAAGGTCATCAGCTAGCTTATGTGCAATTCCCTCAACATTTCAACAATATCAATAAGAATGACCTTTATGCAAATTCTTTCCCTGTCAGCTATCAGATTGAGTTTCCTGGAATGGTTGGCGAAGGAGGAGCAACAATGTTTATAGGAACTGGCTGTTTCCACAGAAGAGAGAGTCTATCAGGAATGCACTTCAAACATTACAACAACACACCAAAATGTGACATCAATCCCAACATTAACATTAACACACAAGATCAAGATCATCATAAGATGATGAGAAGATCAGTGGAAGCACTTATTGAAGCATCAAAAGGTGTAAGCAGTTGTGGGTATGAGGAAGGAAGTGAGTGGGGGAAGGAGAAGGGATTGGTGTATGGGATTCCTGTGGAAGATGTAGTGACAGGGCTTAGGATCTCATGCAGGGGATGGAAATCAATTTACTATAACCCAAAGAGAGCAGCATTTGTGGGTGTGGCTCCCACAACTTTGGAGGTGACTCTTATCCAACATAAGAGGTGGGGAGAAGGCTTGTTCCTCATTTTCTTCTCAAAGTTTTGTCCTTTCATTTGTGGGTATAGAAAGATAAGTTTGGGTGTGCAAATGGGATATTGTGCTTTCCTCTTATGGGCTCCTTTGTCTCTTCCTACTATTGCTTATGCTGTGATTCCTGCTATCTACACACTTTGGGGTATTCCTTTGTTTCCACCGGTCACAAGCCGGTGGATGCTCCCTTTTTTGTATGCCCCACTAGCCACACATGTCTACAGCTTATTGGAGGCCATGAGGTGCGGGTGCAGCATAAAGTCATGGTGGAACTCACAGAGAATGAAGCTATTTCGAAGAACAACCTCCTACTTGTTCAGCTTCATGGACACAGTCAAAATCCAACTAGGATTCTCTGAAACCAAATTTGATGTGACAGACAAGGTTGCTTCAGAAGACACAATGAAGAGGTACGAGGAAGAGGTGGTAGACTTTGGAAGCTCATGCTCGGTGATGTATACTATAATAGCCACTCTCGCTTTGATTAATCTCTTTGGTGTGATTGGAGGGACCAAGAAGGTGCTCGAGGACGATGCATTGGTTTTACAGGTAATGTTATGCGTTTTGATGGTGATGTTGAATAAAGTAGTGTATGAGGCTCTTTTTGTTCGGAGTGATAGAGGTTGCTTGCCCTCTCATGTCTTGGTTAAGTCCCTTGTCTTGGCTTCTTTCGCTTGCTTTTTATTACCATATTTCTTGTGTTAA 2268 0.3964 MTLGSRRSSTVELEKEDDEAPLLFESKEGKWGGAYKLFACTIFAGICMILVYRVMKMPKRGEEGRWGWIAMLWAEVCFGVYWIFTQSLRWTLLYHIPFDHRLFQRYGENKLPGVDIFVCTADPMLEPPNMVINTVLSVMCYNYPSNKLSVYLSDDGASELTFYALLKASIFSKHWIPFCKRFNIEPRSPEAYFSQHYCTIKNTQEWSSIKKLYEDMKSEIELVVEKGKVPDEIRKQHKGFSEWNSKTTKKDHQSIVQIIIDGRDSNGVDDDGFQLPTLVYMAREKRPNFPHHFKAGAMNALIRVSSEISNAPIILNLDCDMYSNNADTIQEVLCFFMDQRQGHQLAYVQFPQHFNNINKNDLYANSFPVSYQIEFPGMVGEGGATMFIGTGCFHRRESLSGMHFKHYNNTPKCDINPNININTQDQDHHKMMRRSVEALIEASKGVSSCGYEEGSEWGKEKGLVYGIPVEDVVTGLRISCRGWKSIYYNPKRAAFVGVAPTTLEVTLIQHKRWGEGLFLIFFSKFCPFICGYRKISLGVQMGYCAFLLWAPLSLPTIAYAVIPAIYTLWGIPLFPPVTSRWMLPFLYAPLATHVYSLLEAMRCGCSIKSWWNSQRMKLFRRTTSYLFSFMDTVKIQLGFSETKFDVTDKVASEDTMKRYEEEVVDFGSSCSVMYTIIATLALINLFGVIGGTKKVLEDDALVLQVMLCVLMVMLNKVVYEALFVRSDRGCLPSHVLVKSLVLASFACFLLPYFLC 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2045 755 Pfam Cellulose synthase 114 423 IPR005150 GO:0016020|GO:0016760|GO:0030244
Sto9g2045 755 Pfam Cellulose synthase 437 746 IPR005150 GO:0016020|GO:0016760|GO:0030244
Sto9g2045 755 SUPERFAMILY Nucleotide-diphospho-sugar transferases 128 525 IPR029044 -
Sto9g2045 755 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 245 411 IPR029044 -
Sto9g2045 755 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 104 194 IPR029044 -
Sto9g2045 755 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 19 749 - -
Sto9g2045 755 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN CSLE 19 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2045 Sto-Chr9 24427567 24432821 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2045 16 753 Glycosyltransferase AT1G55850 45.101 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2045 - - gmx:100816849 958.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2045 9 24427567 24432821 Sto9g2045 9 24427567 24432821 ECH