Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2044 ATGCCAagaagaggagaagaaggaagatggGGTTGGATTGCTATGTTGTGGACAGAAGTGTGCTTTGGATTGTTTTGGATTCTCACTCAGTCTCAACGTTGGAAGACTCTTTATCACACACCCTTCAAGCATAGCCTCTTCCAAAGATATGGTGAAGAAGAGAAATTACCAGGAGTGGACATTTTTGTGTGCACAGCAGATCCAATGTTGGAGCCTCCGATAATAGTGATAAACACAGTGTTATCACTAATGTCTTACAATTATCCTTCAAATAAGCTAAGTGTATACCTCTCTGATGATGGAGGCTCTGAGTTAACCTTCTATGCTCTTCTCAAAGCTTCTATTTTCTCCAAACATTGGATACCTTTCTGTAAAAGATTCAACATTGAACCTAGGTCACCTGAGGCTTACTTTTCCCAACATCATTGTACCATTAAGAATACCCAAGAATGGTGTTCTATTAAGAAATTATATGAAGACATGAAAAGTGAGATAGAGTTAGTTGTGGAAAAGGGTAAGGTTCCAGAAGAAATAAGGAAGCAACACAAAGGATTCTCAGAATGGAATTCCAAAACCACAAAGAAGGACCATCAATCTATTGTGCAGATCATAATTGATGGAAGGGACAGTAATGGTGTAGATGATGATGGATTTCAACTTCCAACTCTAGTTTATATGGCAAGAGAGAAGAGACCCAACTTTCCTCATCATTTTAAAGCAGGAGCAATGAATGCACTAATAAGAGTGTCATCAGAGATAAGCAATGCACCTATCATCGTCAACTTGGACTGTGACATGTACTCAAATAATGCAGATACCATTCAAGAAGCATTGTGTTTCTTCATGGACCAAAAACAAGGCCATCACATAGCTTATGTGCAATTTCCACAAAATTTCAACAACATCAATAAGAATGACCTTTATGCAAATTCTTTCCCTGTCAGCTCTCAGATTGAGTTTCCTGGGATAAGTGGACAAGGATTAGCAACAATTTACTGTGGAACTGGGTGTTTTCATAGAAGGGAGAGTTTATCAGGAATGCATTTCAAAGATTATTACAACAACACAACAAGATGTAACATCAAACCAAACAGCACCCAACATCATAAGATCAGAACAACAGAAGAATTGATTGAAGCATCAAAAGTTGTAAGCAGTTGTAGGTATGAGGAAGGAAGTGAGTGGGGGAAGGAGAAGGGATTGGTATATGGGATTCCTGCAGAAGATGTAGTGACAGGCCTTGTGATCTCATGCAGAGGATGGAACTCCATTTATTATAATCCAAAGAGAGAGGCATTTTTGGGTGTGGCTCCCACAACTTTGGAAGTGAGTCTTGTTCAACATAAGAGGTGGGGAGAAGGCTTGTTTCACATTTTCTTCTCAAAGTATTGTCCTTTCATTTATGGGCATAGGAAGATAAGTTTGGGTGTGCAAATGGGATATTGTGCCTACCTCTTATGGGCTCCTATGTCTCTCCCTACTCTTTCTTATGCTGTGCTTCCTGCTATCTACACACTTTGGGGAATTCCATTGTTTCCACAGGTCACAAGCCCATGGATCCTGCCCTTCTTATATGCCCCACTAGCCACATACCTCTATAGCTTATTAGAGGCCATGAGCTGCGGGTGCACCATAAAGTTCTGGTGGAACTTACAGAGAATGAAACTCTTTCGAAGATCAACCTCCTACTTCTTCGGCTCCATTGACACAGTGAAGATCCAACTAGGATTCTCTGAAACCAAATTTGATGTCACAGACAAGGTTGTGTCAGAAGACACAGTGAAGAGGTACGAGGAAGAGGTGGTAGACTTTGGAAGCTCATGCTCGGTGATGTATACTATAATTGCCACTCTCGCTTTGATTAATCTCTTTGGTGTGATTGGAGGGACCAAGAAGGTGCTCGAGGACGATGCATTGGTTTTACAGGTAATGTTATGCGTTTTGATGGTGATGTTGAATAAAGTAGTGTATGAGGCTCTTTTTGTTCGGAGTGATAGAGGTTGCTTGCCCTCTCATGTCTTGATTAAGTCCCTTGTCTTGGCTTCTTTCGCTTGCTTTTTGTTACCATCTTTAATCTTGTGA 2082 0.4015 MPRRGEEGRWGWIAMLWTEVCFGLFWILTQSQRWKTLYHTPFKHSLFQRYGEEEKLPGVDIFVCTADPMLEPPIIVINTVLSLMSYNYPSNKLSVYLSDDGGSELTFYALLKASIFSKHWIPFCKRFNIEPRSPEAYFSQHHCTIKNTQEWCSIKKLYEDMKSEIELVVEKGKVPEEIRKQHKGFSEWNSKTTKKDHQSIVQIIIDGRDSNGVDDDGFQLPTLVYMAREKRPNFPHHFKAGAMNALIRVSSEISNAPIIVNLDCDMYSNNADTIQEALCFFMDQKQGHHIAYVQFPQNFNNINKNDLYANSFPVSSQIEFPGISGQGLATIYCGTGCFHRRESLSGMHFKDYYNNTTRCNIKPNSTQHHKIRTTEELIEASKVVSSCRYEEGSEWGKEKGLVYGIPAEDVVTGLVISCRGWNSIYYNPKREAFLGVAPTTLEVSLVQHKRWGEGLFHIFFSKYCPFIYGHRKISLGVQMGYCAYLLWAPMSLPTLSYAVLPAIYTLWGIPLFPQVTSPWILPFLYAPLATYLYSLLEAMSCGCTIKFWWNLQRMKLFRRSTSYFFGSIDTVKIQLGFSETKFDVTDKVVSEDTVKRYEEEVVDFGSSCSVMYTIIATLALINLFGVIGGTKKVLEDDALVLQVMLCVLMVMLNKVVYEALFVRSDRGCLPSHVLIKSLVLASFACFLLPSLIL 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2044 693 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 190 356 IPR029044 -
Sto9g2044 693 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 48 160 IPR029044 -
Sto9g2044 693 Pfam Cellulose synthase 373 683 IPR005150 GO:0016020|GO:0016760|GO:0030244
Sto9g2044 693 Pfam Cellulose synthase 59 358 IPR005150 GO:0016020|GO:0016760|GO:0030244
Sto9g2044 693 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 5 687 - -
Sto9g2044 693 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN CSLE 5 687 - -
Sto9g2044 693 SUPERFAMILY Nucleotide-diphospho-sugar transferases 74 462 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2044 Sto-Chr9 24416343 24421101 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2044 12 691 Glycosyltransferase AT1G55850 47.230 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2044 - - gmx:100816849 947.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2044 9 24416343 24421101 Sto9g2044 9 24416343 24421101 ECH