Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1956 ATGAGTACAGTGCCGAAAGAAACTATTGAAGTCATTGCACAGAGCATTGGCATCACCAATTTGTCCCCCGATGTCGCCCTTGCTCTCGCTCCCGATGTCGAGTATCGGGTTCGAGAAATCATGCAGGAGTCCATAAAATGCATGCACCACTCAAAGCGAACTCTTCTTACGACAGACGACGTGGATAGTGCACTTAAATTAAGAAATTTGGAGCCAATATATGGTTTCGCCTCTAATGATCCTCTGCGGTTCAAAAGAGCTGCTGGACACAAGGATTTATTCTACATTGACGACAAAGATGTTGATTTTAAGGATGTGATTGAAGCACCATTACCAAAAGCTCCCCTTGATACATCAATTTCGTCACATTGGCTGGCAATTGAAGGTGTACAACCTGCAATTCCTGAAAATGCTCCTGTTGAAGCTCCTTCTGAGACCAGAAAATCTGAATATAAGGAAGATGGACCTCCTGTTGATATTAAATTACCTGTTAAACATGTAATATCAAGGGAGCTTCAGCtgtattttacaaaaataactGAGTTGATATTGAATAAGCATGGCTCAATTCTACTTAATAAAGCATTAATTAGCTTGGCAACAGACTCAGGCCTCCATCCTTTGGTTCCTTATTTCTCGTACTTCATTGCTGATGAGGTGACACgaaatttgaataatttaaGTCTTTTATTTGCTTTGATGCGTCTTGTTCGGAGCCTTACCCAAAATCCCCACATACACATAGAGCCTTATTTACATCAGTTGATGCCATCTATTATTACCTGCCTTGTTGCCAAAAGGCTAGGGAATAGACTATCTGATAATCATTGGGAGCTTAGAAACTTCAGTGCAAACCTGGTTGCTTCAGTATGCAAAAGATTTGGACATGTTTATCACAATCTTCAATCTCGTGTTACAAAGACATTGCTTCATGCTTTCTTGGACCCTACAAAATCTCTACCTCAACATTATGGTGCAATTAAAGGGATAGCAGCCCTTGGATCCCGCATGGTTCGCATGCTTATACTTCCAAATCTTGAGCCGTATCTGCATCTTCTTGAGCCAGAAATGCAACCTGAGAAACAAAAAAACGAGATGAAGAGACATGAAGCATGGCAAGTTTATGGCGCCTTGCTGTCAGCAGCAGGCCAATGTATTCATGAAAGAGCCAAAATATTCAGTAGTACGCTCTCTCCTCCTCCAACACGTGTTTTCCCAAGAGGCTGTGGAAAAGTTATGACTGCAACACCAAGCAAACGTAAAGCCAGCTCGGACAATATTATGCAGCAACCTCCGCTGAAGAAAACTGCTACAGATGGTACGGGCGGTTTGATGCCAATGAATTCCTTACCTGTGGGGATTTCTAACGTTGTTGGCCTATCATCAATGGCTCATCAgttattaaatgaaaaaaaccCAGGAAGAGATGTTGGAGGTCAGCAAGTTAAGGTATCTGCCACTCTTGCTCAGGCTTGGAAAGATGACATAGATGCGGGACATTTGCTATCATCATTGCATGAACTATTTGGCGAAAGTGTGTTCTCCTTCATTCCAAAAGCTGAAGCATCTATGTTCTTGTGA 1581 0.4118 MSTVPKETIEVIAQSIGITNLSPDVALALAPDVEYRVREIMQESIKCMHHSKRTLLTTDDVDSALKLRNLEPIYGFASNDPLRFKRAAGHKDLFYIDDKDVDFKDVIEAPLPKAPLDTSISSHWLAIEGVQPAIPENAPVEAPSETRKSEYKEDGPPVDIKLPVKHVISRELQLYFTKITELILNKHGSILLNKALISLATDSGLHPLVPYFSYFIADEVTRNLNNLSLLFALMRLVRSLTQNPHIHIEPYLHQLMPSIITCLVAKRLGNRLSDNHWELRNFSANLVASVCKRFGHVYHNLQSRVTKTLLHAFLDPTKSLPQHYGAIKGIAALGSRMVRMLILPNLEPYLHLLEPEMQPEKQKNEMKRHEAWQVYGALLSAAGQCIHERAKIFSSTLSPPPTRVFPRGCGKVMTATPSKRKASSDNIMQQPPLKKTATDGTGGLMPMNSLPVGISNVVGLSSMAHQLLNEKNPGRDVGGQQVKVSATLAQAWKDDIDAGHLLSSLHELFGESVFSFIPKAEASMFL 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1956 526 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 1 526 IPR037796 GO:0000124|GO:0005669|GO:0006367|GO:0016251|GO:0046695
Sto9g1956 526 Pfam TAF6 C-terminal HEAT repeat domain 259 346 IPR011442 GO:0006367
Sto9g1956 526 CDD TAF6C 165 381 IPR011442 GO:0006367
Sto9g1956 526 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 1 526 - -
Sto9g1956 526 MobiDBLite consensus disorder prediction 417 436 - -
Sto9g1956 526 Pfam TATA box binding protein associated factor (TAF) 1 66 IPR004823 -
Sto9g1956 526 SUPERFAMILY Histone-fold 4 76 IPR009072 GO:0046982
Sto9g1956 526 SUPERFAMILY ARM repeat 195 391 IPR016024 -
Sto9g1956 526 SMART TAF_cls 2 68 IPR004823 -
Sto9g1956 526 MobiDBLite consensus disorder prediction 413 440 - -
Sto9g1956 526 Gene3D - 164 369 IPR046344 GO:0006367
Sto9g1956 526 Gene3D Histone, subunit A 1 67 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1956 Sto-Chr9 23725693 23731033 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1956 K03131 - gmx:100799998 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1956 9 23725693 23731033 Sto9g1956 9 23725693 23731033 ECH