Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1950 ATGGGGAGTGAGAACGAGCCAGCGAAGCTCCTATTACCTTACCTTCAACGTGCTGATGAGCTGCAAAAGCACGAGCCTCTCGTCGCTTATTACTGTCGATTATATGCTATGGAACGGGGTTTGAAGATTCCTCAGAATGAGCGTACCAAGACCACAAATTCCCTGCTTGTTTCACTGATGAAGCAGCTTGAAAAGGATAAAAAGTCAATCAAGTTGACACCTGAAGATAATTTACACGTTGAGGGATTTGCCTTAAATGTTTTCGGGAAAGCAGACAAACAAGATCGTGCAGGACGAGCAGATTTGAATACAGCAAAAACATTTTATGCTGCTAGCATTTTTTTTGAGATTCTGAACCAATTTGGGGCACTTCAGCCTGATCTGGAGGAGAAGCAGAAATATGCAGCCTGGAAAGCAGCAGATATAAGGAAGGCTttgaaagaaggaaggaagcCCACGGCTGGCCCACCTGCTGGTGATGAGGATCTGTCAGTTCCATCAGATACTGCTAACCTCGAGACTACAGAAACTTCAGTTACCAGTGCTGGACCAGAATCTGATTTATCACATAATTATAATGATGCTGTTAATTTCCAGCATTCGCCTAGCATTCCTCCGGCACCTAAATTCCATGGTACTGTTGACAATCAGCATTCTACAAACATTGCACCATCTATGCAGTTCCAAGATGGAGTAAATAATAGTCAGCAATCATCCAATATTTCGAGATCATCTTCAGCCTACTCTAGTGCAAGTTATCCATCCCAAGATTACTATCCTCCTCCACCAGCCAGCTCAGAAAGTCCTTATTCTCAGACCTACCACCAACAGTACTCACAGGAGCACTCACCGCATTTAGCTACTAATAATTACCTTTCTCATGAAACTCCCTCTTCTTTCTCCTATCCCCATTTTCAGTCTTATCCAAGTTTCTCAGAAAGCAGCCTACCATCAGTACCAGTGAATTATACTCACTATCAAGGGTCTGATGCTTCATATCCTTCCCAGTCCGCTCCTCTAACAACTAACTACACATCGAGTGCCGAACAAAATTCTAGAAGCAGAAATGAAGCTGTCTCAGAACCTCACTCAGCTTCACAGACTTACCAATATGATAGTAACTACCAACCATCACCTGAAAAAATAGCAGAGGCCCACAAGTCTGCAAGATTCGCTGTTGGGGCATTGGCATTTGATGATGTGTCAGTTGCTGTAGACTACTTGAGGAAATCACTTGAGTTGCTGACAAATCCTTCAGCTGGTCAGTAA 1269 0.4279 MGSENEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQNERTKTTNSLLVSLMKQLEKDKKSIKLTPEDNLHVEGFALNVFGKADKQDRAGRADLNTAKTFYAASIFFEILNQFGALQPDLEEKQKYAAWKAADIRKALKEGRKPTAGPPAGDEDLSVPSDTANLETTETSVTSAGPESDLSHNYNDAVNFQHSPSIPPAPKFHGTVDNQHSTNIAPSMQFQDGVNNSQQSSNISRSSSAYSSASYPSQDYYPPPPASSESPYSQTYHQQYSQEHSPHLATNNYLSHETPSSFSYPHFQSYPSFSESSLPSVPVNYTHYQGSDASYPSQSAPLTTNYTSSAEQNSRSRNEAVSEPHSASQTYQYDSNYQPSPEKIAEAHKSARFAVGALAFDDVSVAVDYLRKSLELLTNPSAGQ 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1950 422 MobiDBLite consensus disorder prediction 213 255 - -
Sto9g1950 422 Pfam Vta1 like 13 148 IPR039431 -
Sto9g1950 422 MobiDBLite consensus disorder prediction 330 381 - -
Sto9g1950 422 Gene3D Immunoglobulin FC, subunit C 378 417 - -
Sto9g1950 422 MobiDBLite consensus disorder prediction 147 283 - -
Sto9g1950 422 Pfam Vta1 C-terminal domain 379 416 IPR041212 -
Sto9g1950 422 MobiDBLite consensus disorder prediction 167 200 - -
Sto9g1950 422 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 1 420 IPR044538 GO:0032511
Sto9g1950 422 MobiDBLite consensus disorder prediction 268 283 - -
Sto9g1950 422 Gene3D - 4 152 IPR023175 -
Sto9g1950 422 MobiDBLite consensus disorder prediction 330 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1950 Sto-Chr9 23673606 23676815 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1950 3 125 Glycosyltransferase AT5G13000 25.735 3.20e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1950 K12199 - gmx:100806599 565.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1950 9 23673606 23676815 Sto9g1950 9 23673606 23676815 ECH