Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1945 ATGTTCGTCTCTAGGGTTTTGTCTCGTGTTTGCAGGAGTGTCTCTCGAAGCTCAACGCTTCTAACTGCCTCCGAAAGGCCCCAGCAATTGCCTATACTCTCTAATCAGTTTCATTCCCTTGTTCATCCATCGCCTAATACGGTAATTCCAGTCCAAGTGAATTCATTGTGGCTACCTATAAATGCATCCTCGACTCTAAGATGTGGATTTTCTTCATCAGCCTCACCCGAAcctaatgaaaaagaaaatggtaATAAAACTGCTGATCCTGCAAAAACAACTGATGATGCTGAAAGTTCTGATTCTGCAACCCAAACTAAAGAATCAGGTTCCATTTCAGAATCTCAGTCTGAATCTGTCAAAAGAAGGAGAGTTACTAAACGAACTGCATTTTCTGATTCAGATTCAGAGAGTGAAACCGATTTGTCCAGGGATGATCTAGTAAAGCTGGTAGCTGAGAAGGAAGAACTCTTGAAGTTAAAGCAAAAGGATATTGAAAAAATGCAGGACAAAGTTCTACGGACTTTGGCAGAAATGGAGAATGTCATGGACAGGACTAGACGTGAAGCAgagaattcaaaaaaatttgCTATTCAGAATTTTGCAAAGAGTTTACTAGATGTTGCAGACAATTTGGGAAGAGCTTCCTCAGTTGTAAAGGATAGTTTTTCCAAAATTGATACATCTAAGGACTCCTCAGGTGCAGCACCACTCCTGAAAACACTTCTTGAAGGTGTTGAAATGACTGACAAACAACTATCAGAGGTACTTAAAAAGTTTGGTGTAGAGAAATTTGATCCTACAAACGAGCCGTTTGATCCACACAGGCACAATGCCGTATTCCAAGTCCCTGATGCCTCCAAGCCTGCAGGCACTGTCGCAGCTGTTCTTAAGGCGGGGTATATGCTTTATGATCGCGTAATTCGTCCGGCAGAAGTTGGTGTAACCCATTCTGTGGAGGATAACAATACAACCGAGAATGGTAATAGCAGCTGA 996 0.4076 MFVSRVLSRVCRSVSRSSTLLTASERPQQLPILSNQFHSLVHPSPNTVIPVQVNSLWLPINASSTLRCGFSSSASPEPNEKENGNKTADPAKTTDDAESSDSATQTKESGSISESQSESVKRRRVTKRTAFSDSDSESETDLSRDDLVKLVAEKEELLKLKQKDIEKMQDKVLRTLAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKIDTSKDSSGAAPLLKTLLEGVEMTDKQLSEVLKKFGVEKFDPTNEPFDPHRHNAVFQVPDASKPAGTVAAVLKAGYMLYDRVIRPAEVGVTHSVEDNNTTENGNSS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1945 331 MobiDBLite consensus disorder prediction 97 116 - -
Sto9g1945 331 PANTHER GRPE PROTEIN HOMOLOG 1 319 - -
Sto9g1945 331 Gene3D - 137 260 IPR013805 -
Sto9g1945 331 MobiDBLite consensus disorder prediction 69 143 - -
Sto9g1945 331 Pfam GrpE 151 316 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Sto9g1945 331 Coils Coil 151 196 - -
Sto9g1945 331 ProSitePatterns grpE protein signature. 272 315 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Sto9g1945 331 CDD GrpE 166 315 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Sto9g1945 331 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 152 261 IPR013805 -
Sto9g1945 331 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 262 316 IPR009012 GO:0006457
Sto9g1945 331 PRINTS GrpE protein signature 173 189 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Sto9g1945 331 PRINTS GrpE protein signature 269 284 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Sto9g1945 331 PRINTS GrpE protein signature 296 315 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Sto9g1945 331 Hamap Protein GrpE [grpE]. 79 317 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Sto9g1945 331 PANTHER GRPE PROTEIN 1 319 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Sto9g1945 331 MobiDBLite consensus disorder prediction 117 143 - -
Sto9g1945 331 MobiDBLite consensus disorder prediction 82 96 - -
Sto9g1945 331 Gene3D Head domain of nucleotide exchange factor GrpE 261 316 IPR009012 GO:0006457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1945 K03687 - qsu:112012962 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1945 9 23644721 23647461 Sto9g1945 9 23644721 23647461 ECH