Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1942 ATGGAGATCGATTCGATGTCCCTCAGTTCAGTCCCGAAAGAGCACGAAAAAATCTACCAGGAGTGGTTCAGTTATGCTGATTCTGATAGCGATGGCCGTCTTACGGGGACCGATGCCATTAAGTTTTTCGGTTTATCCGGCTTGTCTCGTCAGGATCTTAAGCAGGTGTGGGCTATTGCAGATTTAAAGCGACAAGGATATCTTGGTTTTACAGAATTTATCATTGCTATGCAGCTAGTTTCTTTGGCACAATCTGGCCAAGCGATAACACGTGATTTGCTGTCTAGTGATGTTGATTTGGAAAATCTGAAACCTCCCAATATGGAGGTTAGTTCTCAATTGCAGCCATCAATTTCAGCAAATTGGTTTTCGACAAAGTCAACAAAAAAGGTGCCTCTTTCCTCTGTGACATCAATAACTGATGGCTTGAAGAGACTATATATTGAAAAGTTGAAGCCATTAGAAGTTACTTACCGATTTAATGATTTTGTGTCTCCAGCACTGGGAAATAGTGATTTTGATGCCAAACCAATGGTTATGCTTTTGGGAGCTCATATTGGACCTGAGCCTACAACTGATAGGTTTGTTGTTGTTATGTCTGGCCCTGATGAGAGAAGTATTCCTGGTAATACTGTTGCTGTCCAAGCTGATATGCCCTTCAGTGGTCTCACAAGTTTTGGAACatcttttttgtcaaaatttgagTGTTCTCAGATGCCTCATCCTTTACTGGAGCACATTACGTTTGTTGATACTCCTGGAGTTTTGTCTGGAGAAAAGCAACGGACACAGAGACAATATGATTTTACTGGTGTAACATCCTGGTTTGCTGCAAAGTGTGATTTGATACTCCTTCTATTTGATCCTCACAAACTTGATGTTAGTGATGAGTTCAAACGTGTGATATCATCCTTACGTGGGCACGATGACAAAATTCGGGTGGTTTTGAACAAGTCAGATCAAATTGATACTCAACAATTGATGAGGGTTTATGGAGCATTGATGTGGTCACTTGGTAAAGTGCTGAATACTCCAGAAGTTATGCGAGTATATATTGGCTCCTTCAACGACAAACCTGTAAACGAGGCTGTTGGTGGCCCCTTAGGTAAGGAACTCTTTGAAAAAGAACAGGATGACCTTCTTTCAGATCTGAAAGATATACCAAAGAAGGCTTGCGATCGAAGAATAAATGAATTTGTTAAACGAGCCCGGGCCGTCAAGATACATGCTTATATTATCAGTCATCTTAAAAAGGAAATGCCCTCTATGATAGGCAAGGCTAAAACACAGCAAAGGCTCATTAATAACTTGGAAGCTGAATTTGGAAAGGTACAAAAGGAGTTCCATCTACCTCCTGGTGATTTCCCAAACGTTGAGCATTTCAGAGAGGTATTAGGTGGATACAACATTGACAAGTTTGAGAGGTTGAAACCAAAAATGATACAAGCAGTTGATGACATGCTAGCTTATGACATTCCCAACCTCTTGAAGAATTTTAAAAATCCCTATGATTGTTAA 1518 0.4005 MEIDSMSLSSVPKEHEKIYQEWFSYADSDSDGRLTGTDAIKFFGLSGLSRQDLKQVWAIADLKRQGYLGFTEFIIAMQLVSLAQSGQAITRDLLSSDVDLENLKPPNMEVSSQLQPSISANWFSTKSTKKVPLSSVTSITDGLKRLYIEKLKPLEVTYRFNDFVSPALGNSDFDAKPMVMLLGAHIGPEPTTDRFVVVMSGPDERSIPGNTVAVQADMPFSGLTSFGTSFLSKFECSQMPHPLLEHITFVDTPGVLSGEKQRTQRQYDFTGVTSWFAAKCDLILLLFDPHKLDVSDEFKRVISSLRGHDDKIRVVLNKSDQIDTQQLMRVYGALMWSLGKVLNTPEVMRVYIGSFNDKPVNEAVGGPLGKELFEKEQDDLLSDLKDIPKKACDRRINEFVKRARAVKIHAYIISHLKKEMPSMIGKAKTQQRLINNLEAEFGKVQKEFHLPPGDFPNVEHFREVLGGYNIDKFERLKPKMIQAVDDMLAYDIPNLLKNFKNPYDC 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1942 505 Coils Coil 427 447 - -
Sto9g1942 505 SMART eh_3 8 103 IPR000261 GO:0005515
Sto9g1942 505 Pfam N-terminal EH-domain containing protein 142 174 IPR031692 -
Sto9g1942 505 PANTHER EH DOMAIN 120 502 - -
Sto9g1942 505 PANTHER EH DOMAIN 19 108 - -
Sto9g1942 505 Gene3D - 8 108 - -
Sto9g1942 505 ProSiteProfiles EH domain profile. 15 109 IPR000261 GO:0005515
Sto9g1942 505 Gene3D - 183 387 IPR027417 -
Sto9g1942 505 Gene3D - 114 182 - -
Sto9g1942 505 PANTHER BNAC05G31740D PROTEIN 120 502 - -
Sto9g1942 505 PANTHER BNAC05G31740D PROTEIN 19 108 - -
Sto9g1942 505 SUPERFAMILY EF-hand 11 86 IPR011992 -
Sto9g1942 505 Gene3D - 388 495 - -
Sto9g1942 505 CDD EH 19 85 IPR000261 GO:0005515
Sto9g1942 505 Pfam Domain of unknown function (DUF5600) 394 495 IPR040990 -
Sto9g1942 505 ProSiteProfiles EF-hand calcium-binding domain profile. 48 83 IPR002048 GO:0005509
Sto9g1942 505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 427 IPR027417 -
Sto9g1942 505 CDD EHD 183 402 - -
Sto9g1942 505 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 148 389 IPR030381 GO:0005525
Sto9g1942 505 Pfam Cytoskeletal-regulatory complex EF hand 17 80 IPR000261 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1942 Sto-Chr9 23623338 23628548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1942 1 504 EF-hand Containing Proteins AT3G20290 75.780 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1942 K12483 - qsu:112007166 870.152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1942 9 23623338 23628548 Sto9g1942 9 23623338 23628548 ECH