Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1932 CTGCTCTGCTTTTCTCAGAAACAGAGCATCGCAATGGCTTCCCTCCTtttctcattcttcttcttccttctcgcATTCTCTGCTTATGCGGGTTCCATCGGAATAAACTATGGCAGGGTGGCTAACGACCTTCCTCCGCCGTCCAAGGTGGTGGAGCTTCTGAAATCCATCGGAATCACCCGGGTCAAGCTCTACGACACCAACGCAGACGTCCTCACCGCCCTCGCCAACTCCGGCATCTCCGCAGTCGTCGCCCTCCCCAACGAGCTCCTCTCCTCCGCCGCCGCCGACCAGTCCTTCACCGACCAATGGGTCCAATCCAACATCTCCCCCCACCTCCCCGCCACCCAATTCGAAGCCATTGCCGTGGGAAACGAAGTCTTCGTCGACCCGAATAACACGACCCGATTCCTCGTACCCGCGATGAAGAACGTCCACGCCTCCCTCACAAAACTCAACCTCGACGGCAAAATCAAAATCTCCTCGCCGATTGCCCTCTCGGCGCTCCAATCCTCCTACCCGCCATCATCCGGATCCTTCAAAACGGATCTAACCGAACCCGTGATCAAGCCCATGCTGGACTTCCTCCGCCAGACCGGGTCCTACCTCATGGTGAACGCGTACCCGTTTTTCGCCTACGAAGCCAACACCGATACGGTGTCGTTGGACTACGCGCTGTTCAAGCCGAACGCGGGAGTCGTCGACTCCGGGAACGGATTGCGTTACGCGAGCCTCCTCGAGGCTCAGCTCGACGCCGTTTACGCCGCGATGTCGGCTCTTAAATACGACGACGTACAGGTCGTTGTATCGGAGACGGGATGGCCATCGAAGGGCGATTCCAACGAAGTCGGGGCAAGCGCGGACAATGCGGCGACGTATAACGGAAATCTCGTACAGCGCGTGCTCACAGGTGGTGGGACCCCTCTGAGGCAGAAGGACCCACTCAGTGTCTACCTATTCGCCCTCTTCAACGAGAATCAGAAATCGGGTCCCACATCGGAGAGGAATTATGGACTCTTCTACCCCAACGAGCAGAAGGTGTACGATATTTCGCTCACATTGACGAATGAGTCCACGACGGTGACCAACGTGAGCAAGAGTCAAACTCCGGCGGCGTCGCCGTCGTCTCGAGGCGGAGGCCAGACGTGGTGCGTGGCGAACGGCGGTTCCGCGGCGGAGAAGCTTCAGGCGGCGCTGGATTATGCGTGCGGCGAAGGAGGCGCGGATTGCGGTCCGATTCAGCCGGGTGCCACGTGTTACAATCCTAACTCGTTGGAGGCGCATGCATCCTATGCGTTTAACAGTTACTACCAGAAGAAGTCACGTGGAGCCGGCACGTGCTACTTCGGAGGGACCGCGTTTGTAGTCACTCAGCCTCCTAAGTTTGGAAATTGCGAATACCCCACAGGATACTGA 1416 0.5699 LLCFSQKQSIAMASLLFSFFFFLLAFSAYAGSIGINYGRVANDLPPPSKVVELLKSIGITRVKLYDTNADVLTALANSGISAVVALPNELLSSAAADQSFTDQWVQSNISPHLPATQFEAIAVGNEVFVDPNNTTRFLVPAMKNVHASLTKLNLDGKIKISSPIALSALQSSYPPSSGSFKTDLTEPVIKPMLDFLRQTGSYLMVNAYPFFAYEANTDTVSLDYALFKPNAGVVDSGNGLRYASLLEAQLDAVYAAMSALKYDDVQVVVSETGWPSKGDSNEVGASADNAATYNGNLVQRVLTGGGTPLRQKDPLSVYLFALFNENQKSGPTSERNYGLFYPNEQKVYDISLTLTNESTTVTNVSKSQTPAASPSSRGGGQTWCVANGGSAAEKLQAALDYACGEGGADCGPIQPGATCYNPNSLEAHASYAFNSYYQKKSRGAGTCYFGGTAFVVTQPPKFGNCEYPTGY 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1932 471 PANTHER O-GLYCOSYL HYDROLASES FAMILY 17 PROTEIN 15 464 - -
Sto9g1932 471 SUPERFAMILY (Trans)glycosidases 33 351 IPR017853 -
Sto9g1932 471 Pfam X8 domain 382 453 IPR012946 -
Sto9g1932 471 ProSitePatterns Glycosyl hydrolases family 17 signature. 265 278 IPR000490 GO:0004553|GO:0005975
Sto9g1932 471 SMART X8_cls 382 467 IPR012946 -
Sto9g1932 471 Gene3D - 379 467 - -
Sto9g1932 471 Pfam Glycosyl hydrolases family 17 33 351 IPR000490 GO:0004553|GO:0005975
Sto9g1932 471 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 15 464 IPR044965 GO:0004553|GO:0005975
Sto9g1932 471 Gene3D Glycosidases 31 359 - -
Sto9g1932 471 MobiDBLite consensus disorder prediction 361 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1932 Sto-Chr9 23540046 23542232 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1932 28 460 Glycoside Hydrolase AT5G55180 72.517 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1932 - - gmx:100803406 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1932 9 23540046 23542232 Sto9g1932 9 23540046 23542232 ECH