Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1930 ATGTGGCTGTCGGAGAAGAGGCTCAAGAGGTTCAGGCGCCGAACGACGGAACCTTGCCGGATCAGGAGTCATTTCCATCAGAGGGTCACCTGGCGTCACCATTCTGCCCTCACCGATGGCCTTGAACAAGGGGTGGACTTGGTGGGAGGGTACTATGACGCAGGGGATAATGTCAAATTTGGGCTTCCAATGGCATTCACCATAACGTTGCTCTCATGGGCCGTCATCGAGTACGGCGGCGACATTGCCGGCGCCGGCGAGTACGCTCACGCTCTCGAAGCCATCAAGTGGGGCACTGATTATTTCATCAAAGCACATACGCATCCTCATGTTCTCTGGGcgcaggttgGCGATGGTTACACTGATCATTACTGTTGGCAGAGGCCGGAGGACATGACGACTTCCCGTCGAGCGTACAAGGTTGATGTTGACAACCCCGGCTCGGAAATTGCCGGAGAGACGGCGGCGGCCATGGCGGCAGCGTCTATAGTGTTTAGGAGAACAAACCCACATTACTCTCACCTACTATTGCAGCATGCACAACAGTTATTTGAGTTTGGGGAGAAGTACAAGGGGAAGTATGATGAGAGCATTGGAGTGGCGAAAGGGTATTACACATCTGTGAGTGGGTACAAGGATGAGTTATTGTGGGCTGCCACGTGGCTATATAAGGCCACTAAAAGGGAAGAATATTTGAAGTATGTTTTGGAGAATGGTTATGACTTTGGTGGGACCACTTGGGCTATCACTGAATTCAGCTGGGACGTTAAATATGCTGGTGTTCAGATCATTGCTTCCATGGTaatttctaattatcaattctcTAAtctccttattttattttatttttttaatctcaaaaAGTATTTACTTTTGGTCAACTTTCTCATGctTCTAATGGAAGAGAAGCACGAGAAGAAAAACGAAGGCATACTCAAACAATACCGTTCAAAAGCGGAGCACTACCTCTGCGCGTGCCTCAATCAGAACAACATAACCAACGTGCGACGCACCCCAGCCGGCTTACTCTACACCCGCCAATGGAACAACATGCAATACGTCGCAACGGCGTCGTTCCTCCTCACAGTCTACTCCGATCACCTTCTTCGAGCCGCACACCCTCACACGACGCTCCACTGCGAACGCGGACAAGTCTCGCCGCAGCAGATCCTAGCCTTCGCGAAATCCCAAGCGGACTACATCCTGGGCTCCAACCCAATGGGCCTCAGCTATTTAGTGGGCTACGGAGCCCAATTCCCACTGCGGGTGCACCATAGGGGCGCGTCCATAGAATCGTTCAGAGGGAACAAGGGTTTTATCGGGTGCACGCAGGGGTATGATAACTGGTACGGACGGCGTGATCCTAACCCTAATGTGGTGATTGGGGCTTTGGTTGGTGGGCCCGACGATAAGGACGTGTTTAGAGATGAGAGGGGGAATTACGTGCAGACGGAAGCATGTACTTACAATACAGCCGCAGTTGTGGGAGTTTTTGCTAGATTGATTAGATTAGAAAAAGAAGGTGATGCTTAttattatgatgatgatgataatgataatgatggtTCTTTGCCTTTGATTGCTTCTAGTTGA 1593 0.4809 MWLSEKRLKRFRRRTTEPCRIRSHFHQRVTWRHHSALTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITLLSWAVIEYGGDIAGAGEYAHALEAIKWGTDYFIKAHTHPHVLWAQVGDGYTDHYCWQRPEDMTTSRRAYKVDVDNPGSEIAGETAAAMAAASIVFRRTNPHYSHLLLQHAQQLFEFGEKYKGKYDESIGVAKGYYTSVSGYKDELLWAATWLYKATKREEYLKYVLENGYDFGGTTWAITEFSWDVKYAGVQIIASMVISNYQFSNLLILFYFFNLKKYLLLVNFLMLLMEEKHEKKNEGILKQYRSKAEHYLCACLNQNNITNVRRTPAGLLYTRQWNNMQYVATASFLLTVYSDHLLRAAHPHTTLHCERGQVSPQQILAFAKSQADYILGSNPMGLSYLVGYGAQFPLRVHHRGASIESFRGNKGFIGCTQGYDNWYGRRDPNPNVVIGALVGGPDDKDVFRDERGNYVQTEACTYNTAAVVGVFARLIRLEKEGDAYYYDDDDNDNDGSLPLIASS 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1930 530 PANTHER ENDOGLUCANASE 294 506 - -
Sto9g1930 530 PANTHER ENDOGLUCANASE 24 272 - -
Sto9g1930 530 SUPERFAMILY Six-hairpin glycosidases 26 507 IPR008928 GO:0005975
Sto9g1930 530 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 400 426 IPR018221 -
Sto9g1930 530 Pfam Glycosyl hydrolase family 9 27 497 IPR001701 GO:0004553|GO:0005975
Sto9g1930 530 PANTHER ENDO-1,4-BETA-GLUCANASE 294 506 - -
Sto9g1930 530 PANTHER ENDO-1,4-BETA-GLUCANASE 24 272 - -
Sto9g1930 530 Gene3D - 21 505 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1930 Sto-Chr9 23515724 23521914 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1930 22 500 Glycoside Hydrolase AT2G32990 69.583 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1930 - - gmx:100786912 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1930 9 23515724 23521914 Sto9g1930 9 23515724 23521914 ECH