Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1896 ATGGAGGAAATCGACGAGATCGAAGCCGTCCCTCAGGTTTACATGACATGCATTCTACATGGTCATAGAATAGGGGTTTCTTATTATGATTCCAGCACTCGCCAACTTTATGTGCTTGAAGTTTGGGATGATGGTGACACAGGTTTCCCACTGATTGATCTGGGTTTGAGTGTTTTCCTTAGTAGCTATTATTGTATTCTAGTATTTGATTTGCCTCATAGTTATAATGTCTCTGCAGTGAAATATCAAGCAGACCCTTTGCGGGGCCGTTTTACCTATTTTAGTGATGCAGATGATGTAGACAAGGCTCCTACAGTAAAGCTTGTGAAAAGTTCAATATTTAGCTATGAGCAAGCATGGCACAGATTAATTTATCTTCGGGTAGCAGGGATGGTTGATGGTTTAAACGTCAAGGAGAGGATTTGCTATTTGAATTCCATGATGGACTTGGGAAGTGAAATGCAAGTTCGTGCCAGTGGTGGCCTTCTTGCAATATTAGAGAACGAGAGGATTGTAGATACTCTTGAGCAAAAGGAATCTGGAAATGCATCAATTGCAATAGATTCAATAGCAGAAGTTTCACTAAATAAATTTCTCAAACTTGATGCAGCAGCTCATGAAGCATTGCAGATATTCCAAATAGACAAGCATCCAAGCCATATGGGCATTGGTCGGGCAAAAGAAGGGTTTTCTGTATTTGGGATGATGAATAAGTGTGTGACTCCACCAGGTAGACGTCTTTTAAGAAACTGGTTCTTGAGGCCAATACTTGACCTTGAAATTCTCAATTACCGTTTAAATGCTAtatctttctttatttgctCAGAAGAACTAGTAGCTTCTTTACACGAAACCCTGAAATCTGTAAAGGATATTCCTTACTTGCTGAAGAGTATTCGTGCGCTGTTGCATATTAACAAGATATTTGAAGTTGGAATTTCGGAAGGTCTTCAAGAAGAATTGAAGTACTTGAACTTGGATATTGTTGATAAGGCAATTTCATGCATAACCACAGAGCTTACTTATGTCTATGAGCTGGTAATTGGCGTTATTGATGTAAATAGAACAAAAGAGAAGGGATATGCGACAGTGGTCAAAGAAGGTTTTTGTGATGAGTTGGATGAGCTGAGGCAAATATACGAGGAACTACCAGAATTCCTGGAAGAGGTATCATTATTGGAACTTGCACTACTTCCTGATCTATACAAGGATAGGCTCGTTCcttgtattgtatatatacaacaaataGGTTACTTAATGTGCATCTTTGAAGAAAAACTTGAAGAAACCACTCTGGAGAAACTTGAAGATTGGGAATTTACATTCTCTGATGTAGATGGAGAGACAAAAAGATTCTTCTATCGTACACCAAAGACACGAGAATTAGACAGTCTTCTAGGAGATATCTATCATAAGATTTTAGATATGGAGAGGGCAATTACTAGAGATTTGCTGACACACATACTTGTGTTCTCAACCCATTTGATAAAGGCAACAAATTTTGCAGCTGAACTGGACTGCTTTTTGTCATTGGCAATGGTTGCTCGTCAGAACAATTATGTTAGGCCTTTATTGACTGAGGAAAGCTTGATCGACATAAAAAATGGAAGGCATGTTTTGCAGGAAATGACAGTAGACACATTTATACCCAATGATACAAAGATTCTTCGTGATGATGAAATTTGCTTTCAGGTGGCACTAATCGTCTTCCTCTCGCACATTGGTAGTTTTGTGCCTGCGGATGCAGCAACGGTGGGTTTGACTGATAGAATTTTTTGTGCAACGGGAAGTAGGCTTATGACAGCAGAACAATCAACATTTATGATTGATCTACATCAAGTAGGAATGATGCTAAGGCATGCAACTTCACAATCTTTATGTCTGGTGGATGAATTTGGTAAAGGTACTCTTACAGAAGATGGTATCGGCTTGCTGGGTGGGACCATAAGTCACTTTGTCACTTGCAATGAGACCCCCAAGGTTTTTGTGTGCACGCATCTCACTGAGCTATTGCAGGAGCGTTACTTAGACAAGTCTACAAAGATTCAGTTGCAAACAATGAGTGTTCTGAGGCCTGACAACAATTCCACACGGATGGAAGACATTGTATTTTTATACAGGCTGGTTCCTGGGCTTGCACATCATAGCTATGGGCTTCACTGTGCACAACTTGCAGGTGTCCCAAATGAAGTTATAGAAAGAGCAGAAATTGTGTTGGATGCTGTTGTAAACAATAAGAATATTGAACGACTCTGCAATGAAAACATATCAGCTCAAGATCGTCTATATAAGGATGCCATGGAGAAGTTGTTGCATTTCGACATAAACAAAGGCGACTTAAACCTTTTTTTCCAGGATATGTTTCCTTAG 2370 0.3903 MEEIDEIEAVPQVYMTCILHGHRIGVSYYDSSTRQLYVLEVWDDGDTGFPLIDLGLSVFLSSYYCILVFDLPHSYNVSAVKYQADPLRGRFTYFSDADDVDKAPTVKLVKSSIFSYEQAWHRLIYLRVAGMVDGLNVKERICYLNSMMDLGSEMQVRASGGLLAILENERIVDTLEQKESGNASIAIDSIAEVSLNKFLKLDAAAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPPGRRLLRNWFLRPILDLEILNYRLNAISFFICSEELVASLHETLKSVKDIPYLLKSIRALLHINKIFEVGISEGLQEELKYLNLDIVDKAISCITTELTYVYELVIGVIDVNRTKEKGYATVVKEGFCDELDELRQIYEELPEFLEEVSLLELALLPDLYKDRLVPCIVYIQQIGYLMCIFEEKLEETTLEKLEDWEFTFSDVDGETKRFFYRTPKTRELDSLLGDIYHKILDMERAITRDLLTHILVFSTHLIKATNFAAELDCFLSLAMVARQNNYVRPLLTEESLIDIKNGRHVLQEMTVDTFIPNDTKILRDDEICFQVALIVFLSHIGSFVPADAATVGLTDRIFCATGSRLMTAEQSTFMIDLHQVGMMLRHATSQSLCLVDEFGKGTLTEDGIGLLGGTISHFVTCNETPKVFVCTHLTELLQERYLDKSTKIQLQTMSVLRPDNNSTRMEDIVFLYRLVPGLAHHSYGLHCAQLAGVPNEVIERAEIVLDAVVNNKNIERLCNENISAQDRLYKDAMEKLLHFDINKGDLNLFFQDMFP 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1896 789 ProSitePatterns DNA mismatch repair proteins mutS family signature. 625 641 IPR000432 GO:0005524|GO:0006298|GO:0030983
Sto9g1896 789 PANTHER MUTS PROTEIN HOMOLOG 5 22 772 - -
Sto9g1896 789 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 520 740 IPR027417 -
Sto9g1896 789 SUPERFAMILY DNA repair protein MutS, domain III 202 519 IPR036187 -
Sto9g1896 789 SMART DNAend 227 544 IPR007696 GO:0005524|GO:0006298|GO:0030983
Sto9g1896 789 Gene3D - 199 403 - -
Sto9g1896 789 Gene3D - 520 776 IPR027417 -
Sto9g1896 789 PIRSF MSH2 136 774 IPR011184 GO:0005524|GO:0006298|GO:0030983
Sto9g1896 789 PIRSF MSH2 1 55 IPR011184 GO:0005524|GO:0006298|GO:0030983
Sto9g1896 789 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 22 772 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Sto9g1896 789 Pfam MutS domain III 206 512 IPR007696 GO:0005524|GO:0006298|GO:0030983
Sto9g1896 789 Pfam MutS domain V 564 740 IPR000432 GO:0005524|GO:0006298|GO:0030983
Sto9g1896 789 SMART mutATP5 564 740 IPR000432 GO:0005524|GO:0006298|GO:0030983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1896 K08741 - gmx:100797567 1183.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1896 9 23251767 23265925 Sto9g1896 9 23251767 23265925 ECH