Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1895 ATGGAGGGAGTGAGAAGAATAGTGAACGAGATCGCCTACACTCAGAGTATCGCTAAGCTTCCTCCTCTTCGACGCTCTCTCGTTCCTTTACTTTTTGCTGCTTCTTCTATCTACAAACTCCTACTTTCTCTGCGCCACCATCTCTACCAGCTTGGCTTCTTCCAAAAGCACCGGTTACCCGTTCCTGTTATAAGTGTTGGGAATTTGACTTGGGGAGGCAATGGGAAGACACCGATGGTTGAATTCATAGCACTCTGGTTAGCTGATTCTGGAATTTCACCTCTGATTCTTTCAAGGTGCTTAGGGCAGGCTGTGGAGATGAAAATAGCTAGAATACAGTGTTCTCTACGACCCCTACAACAGTTTACTAGATATTGTCAATTAAATATAGCACCTCAACATCAGAACCTCCAAATTCTTTGGCTCTTGCATCCTGCAAGTGTCAATCAATTATCTCAACTTTGCACCAATAGAAGCATCTCGAATCTACCAAATTGGTCTGTTTTAATAAGCAAGTACATTAACCAAGGATCATTGAGAGAGGCCCTGGATGTATACAAACAAATTCGCTATGAAGGAGTCTACTATTTTGGTGTAATCCCTTTGTTGCTCAAGGCTTGTGCTTCTCTTTCATTCCTTGATTATGGGAAGGCTTTGCATGCAGAGTCCATTAAGGCTGGCTCAGACAGTGACATAATGATTGGAACTGCACTAATTGATATTTATGCTAAGTGTGGCACTGTTCTTGATTCCCATCAGTTATTTGAAGCTATGCCTCAGAAAAATGTTGTCACTTGGAATGCCATGATTAATGGGTACTTAAAAAATGGGGATATAAATTCTGCCTCAATTCTATTTGACAAGATGCCTGGACAAACAGCGGTAACTTGGAGTCAGATGATTGATGGGTTTGCAAGGAGTGGGGACCTTGTCACAGCTAGGCAATTGTTTGATAGAGTTCCTCCTGATTTGAAGAATGTGAGAACATGGACTGTGATGGTTGATGGGTATGCTAGAAGAGGGAAGATGGAAGCTGCTAGGGAGATCTTTGAGCAGATGCCTCAGCGAAATTTCTTTGTTTGGTCATGTATGATTTGCGGGTACTCAAAGATAGGCAATGTCAGAGAGGCCAGGGCCATTTTTGGAAGGGTTCTGGTCCGGAATATGGAGATATGGAATTCCATGCTTTCCGGTTATGTCCAAAATGGATTTTTTGAGGAAGCACTGCAAGCATTTGCTGATATGCAAGCTGATGGATTCGAGCCAGATGAGTTTACTGTTGTTAGTATTTTATCTGCTTGTGCTCAGCTGGGGCTTCTTGCTTCTGGTAAAAAAATCCACCATATGATAAGACATAAAGAGATCAAGATGAATCACTTTGTTCTGTGTGGATTAATTGACATGTATGCAAAATGTGGGGACTTAATCAATGCAAGATTGGTCTTTGAAGAGTTTACTAAAAGGAACATCTTCTGCTGGAATGCTATGTTATCTGGTTTTGCCATCAATGGAAAATGCCATGAAGTTCTTGAGTTTTTTGGCAGAATGGAGAATTCAAACATAAAGCCTGATGGTATCACCTTTCTTACTGTACTCACAGCTTGTGCTCATGGGGGTTTGGTCAATGAAGCTTTGGAAGTAATATCCAAAATGGAGACATGTGGTGTGGAAATAAGTATCAAGCATTATGGATGCATGGTTGATCTCTTGGGGAGAGCAGGGAGATTAAAAGAGGCTGATGAGTTGATAAAAAGAATGCCAATGGAACCCAATGACACAGTTTTGGGGGCAATGCTTGGTGCATGCTGGATTCATTCCGATTTGAAAATGGCAGAAGAAGTAATGAAGGAAATTAGTGCACAAAGTTTGGACTTCCTTTTTGGCAATAATTCTTACAATGTGCTAATGTCAAATATCTATGCAGCTTCTGAAAAATGGGAGAAAGCTGAAAGGATGAGGATGGTCCTGGGCTATGGAGGTGGGGATGAAGTCAACATGCTCCGAAGGCATTTTCTTGGGACACCAACTAAGTTTGGTGTTGGTGCAAATCGAGCAGCTGTAGCAAGCcattttatccaaaaatatGGCTATGTTGATACCCATAAAAGTTCATGGAATGAAGAGCTTTCCCTTAATTGGAAGATGCAGAGTTATCCTGAATCTGAAAAAGTTGGGGTTGTAGTTCTTGATGATGCAATGCAGCATTGGAGCTTGAGACGAGATCTGGAGATTGTAATGGTTAACGGATTGAGTCTTTGGGGTAACCTTCAACTACTGCCACTTGGACCGTTAAGGGAACCCTTGACTGCTCTTAGACGAGCAGATGTCGTCGTTGTACATCATGCAGACTTGGTTTCTGAAGATACCCTCAAGGATATTGAATCTAACATTCAAGGGGTCAAAAAGTCTGTTCCTATGTTCTTTACAAAAATGGATCCGTCTTACTTATTTGACGTGGGGGTTATCAATTCCAAAATACCTTTGAGAGCTCTGCATGAAGCTCTTGTATTATGTGTTTCTGCCATCGGTTCTGCAGATTCTCTTGTCAAGCAGATCCAAAAgATGGGGGCCATTTATGTTGACCGAGTTGACTTTAGTGATCACCATAAGTTTGATGCCAGGGATATTGATATGATTAGAGCCAGACTTCGAGAACTAGAGGACAAGTTTGGTTGCGAGCCAATTGTCTTAGTGACTGAAAAGgATTTTGATAGGGACCCGGAGATCCTTAAGCAATTATATCCATTCAAAGTTTTAGTACTCTGTTCTAAGTTGAAGGTGGTGTCCTACAATGGAAGCACAGAGGATAGCTTTAAGAAGTTTCTGAAGGATCAGCTTGTTGCAATGTAA 2850 0.4133 MEGVRRIVNEIAYTQSIAKLPPLRRSLVPLLFAASSIYKLLLSLRHHLYQLGFFQKHRLPVPVISVGNLTWGGNGKTPMVEFIALWLADSGISPLILSRCLGQAVEMKIARIQCSLRPLQQFTRYCQLNIAPQHQNLQILWLLHPASVNQLSQLCTNRSISNLPNWSVLISKYINQGSLREALDVYKQIRYEGVYYFGVIPLLLKACASLSFLDYGKALHAESIKAGSDSDIMIGTALIDIYAKCGTVLDSHQLFEAMPQKNVVTWNAMINGYLKNGDINSASILFDKMPGQTAVTWSQMIDGFARSGDLVTARQLFDRVPPDLKNVRTWTVMVDGYARRGKMEAAREIFEQMPQRNFFVWSCMICGYSKIGNVREARAIFGRVLVRNMEIWNSMLSGYVQNGFFEEALQAFADMQADGFEPDEFTVVSILSACAQLGLLASGKKIHHMIRHKEIKMNHFVLCGLIDMYAKCGDLINARLVFEEFTKRNIFCWNAMLSGFAINGKCHEVLEFFGRMENSNIKPDGITFLTVLTACAHGGLVNEALEVISKMETCGVEISIKHYGCMVDLLGRAGRLKEADELIKRMPMEPNDTVLGAMLGACWIHSDLKMAEEVMKEISAQSLDFLFGNNSYNVLMSNIYAASEKWEKAERMRMVLGYGGGDEVNMLRRHFLGTPTKFGVGANRAAVASHFIQKYGYVDTHKSSWNEELSLNWKMQSYPESEKVGVVVLDDAMQHWSLRRDLEIVMVNGLSLWGNLQLLPLGPLREPLTALRRADVVVVHHADLVSEDTLKDIESNIQGVKKSVPMFFTKMDPSYLFDVGVINSKIPLRALHEALVLCVSAIGSADSLVKQIQKMGAIYVDRVDFSDHHKFDARDIDMIRARLRELEDKFGCEPIVLVTEKDFDRDPEILKQLYPFKVLVLCSKLKVVSYNGSTEDSFKKFLKDQLVAM 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1895 949 Pfam PPR repeat 329 358 IPR002885 -
Sto9g1895 949 Pfam PPR repeat 295 319 IPR002885 -
Sto9g1895 949 Pfam PPR repeat 563 587 IPR002885 -
Sto9g1895 949 Pfam PPR repeat 166 194 IPR002885 -
Sto9g1895 949 Pfam PPR repeat 360 386 IPR002885 -
Sto9g1895 949 PANTHER OS01G0913400 PROTEIN-RELATED 253 656 - -
Sto9g1895 949 PANTHER OS01G0913400 PROTEIN-RELATED 148 257 - -
Sto9g1895 949 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 388 422 IPR002885 -
Sto9g1895 949 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 162 196 IPR002885 -
Sto9g1895 949 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 326 360 IPR002885 -
Sto9g1895 949 SUPERFAMILY TPR-like 254 386 IPR011990 GO:0005515
Sto9g1895 949 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 262 296 IPR002885 -
Sto9g1895 949 Gene3D Tetratricopeptide repeat domain 290 356 IPR011990 GO:0005515
Sto9g1895 949 SUPERFAMILY TPR-like 340 490 IPR011990 GO:0005515
Sto9g1895 949 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 524 558 IPR002885 -
Sto9g1895 949 Gene3D Tetratricopeptide repeat domain 460 671 IPR011990 GO:0005515
Sto9g1895 949 Pfam Tetraacyldisaccharide-1-P 4'-kinase 29 108 IPR003758 GO:0005524|GO:0009029|GO:0009245
Sto9g1895 949 Pfam Tetraacyldisaccharide-1-P 4'-kinase 661 942 IPR003758 GO:0005524|GO:0009029|GO:0009245
Sto9g1895 949 Pfam PPR repeat family 261 289 IPR002885 -
Sto9g1895 949 Pfam PPR repeat family 388 435 IPR002885 -
Sto9g1895 949 Pfam PPR repeat family 489 536 IPR002885 -
Sto9g1895 949 Gene3D Tetratricopeptide repeat domain 165 289 IPR011990 GO:0005515
Sto9g1895 949 Gene3D Tetratricopeptide repeat domain 357 459 IPR011990 GO:0005515
Sto9g1895 949 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 489 523 IPR002885 -
Sto9g1895 949 PANTHER BNACNNG13520D PROTEIN 253 656 - -
Sto9g1895 949 PANTHER BNACNNG13520D PROTEIN 148 257 - -
Sto9g1895 949 TIGRFAM PPR: pentatricopeptide repeat domain 526 559 IPR002885 -
Sto9g1895 949 TIGRFAM PPR: pentatricopeptide repeat domain 360 388 IPR002885 -
Sto9g1895 949 TIGRFAM PPR: pentatricopeptide repeat domain 264 289 IPR002885 -
Sto9g1895 949 TIGRFAM PPR: pentatricopeptide repeat domain 391 424 IPR002885 -
Sto9g1895 949 TIGRFAM PPR: pentatricopeptide repeat domain 329 358 IPR002885 -
Sto9g1895 949 TIGRFAM PPR: pentatricopeptide repeat domain 295 319 IPR002885 -
Sto9g1895 949 TIGRFAM PPR: pentatricopeptide repeat domain 491 524 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1895 Sto-Chr9 23242520 23249145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1895 162 653 Glycoside Hydrolase AT3G49170 29.586 2.60e-63 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1895 - - gmx:100802813 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1895 9 23242520 23249145 Sto9g1895 9 23242520 23249145 ECH