Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1876 ATGGAGAATACTGGAAGTGGTGCCTTTATGAGGAACAGAAGGTTGGAGAGCTTCTTGAACACAAGCTCTGGCCAGAGGGTGGAAGAGAGTCCTAAAGTTTCAGTGAAAGATGAATCAGAAAGGCGGCTGAGAACCGACAAATTtgcagatgatgatgatgggtgGTTTTTGATGATCATATCATGGATCAGAATTATCATATGTTTTGTGTCTATGATGGTTACAACATTCATATGGGCATTGATCATGTTTGTGCTTATACCATGGCCCTATGAGAGAATTAGGCAAGGAAACATTTATGGCCATGTGACTGGTAGAATGCTGATGTGGATTCTAGGCAATCCTATAAAAATTGAAGGCTCTGAATACTCCAACAAGAGGGCCATTTACATCAGTAATCATGCATCTCCAATAGACATATTTCTTATAATGTGGTTGACTCCTACTGGCACTGTCGGTATTGCAAAGAAGGAGATTATATGGTATCCTCTTTTTGGTCAACTTTACGTTTTGGCTAACCATCTTCGTATAGACCGATCGAACCCAACTGCAGCTATCGAGTCCATGaaagagGCAGTTCGTGCAGTTTTGAAAAACAATCTGTCTTTGATCATTTTCCCGGAGGGCACCCGGTCCAAGAACGGACGGCTACTTCCATTCAAAAAGGGTTTTGTTCATTTGGCAATACAATCGCGCCTTCCGATCGTTCCAATGGTCCTGACCGGTACTCATCGAGCTTGGAGGAAAGGCAGCTTACACGTACGTCCGGCGCCTCTTTCCGTGAAGTATCTTCCTCCGATAAGCACCGAAAATTGGACGGTAGATAAGATCGATGACTATGTCAAAATGGTACATAACTTGTATGCTCAACATCTTCCACAGACTCAGAAACCTTTGGCTGAGGTACCTCTTGTGAAAACCATGGCTGAAGGTTCTTCTTTGTGA 945 0.4201 MENTGSGAFMRNRRLESFLNTSSGQRVEESPKVSVKDESERRLRTDKFADDDDGWFLMIISWIRIIICFVSMMVTTFIWALIMFVLIPWPYERIRQGNIYGHVTGRMLMWILGNPIKIEGSEYSNKRAIYISNHASPIDIFLIMWLTPTGTVGIAKKEIIWYPLFGQLYVLANHLRIDRSNPTAAIESMKEAVRAVLKNNLSLIIFPEGTRSKNGRLLPFKKGFVHLAIQSRLPIVPMVLTGTHRAWRKGSLHVRPAPLSVKYLPPISTENWTVDKIDDYVKMVHNLYAQHLPQTQKPLAEVPLVKTMAEGSSL 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1876 314 CDD LPLAT_AGPAT-like 106 278 - -
Sto9g1876 314 Pfam Acyltransferase 116 240 IPR002123 GO:0016746
Sto9g1876 314 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE ALPHA 55 297 - -
Sto9g1876 314 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 64 299 - -
Sto9g1876 314 SMART plsc_2 128 243 IPR002123 GO:0016746
Sto9g1876 314 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 55 297 - -
Sto9g1876 314 TIGRFAM AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 122 240 IPR004552 GO:0003841|GO:0008654|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1876 Sto-Chr9 23072331 23074990 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1876 65 251 Acyl Lipid Metabolism Gene Families AT4G30580 32.487 3.92e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1876 K13509 - pvu:PHAVU_006G042300g 514.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1876 9 23072331 23074990 Sto9g1876 9 23072331 23074990 ECH