Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto8g4543 | ATGCTGCATAAGATAAAAGCGGACGTGGAATTGAAGGAGCAAAGTAAGAGGGGGAAAGAGGCTGAGGAGAGACATGAGACGGAAGAGGGATTGCTGAGGAAATCTTTGGAAGATACGAGGAAGAGGGAGGAAGAACAAGATAAAACTATTAAAAGGCTTAGGAAGGAGAATTGTAAGCTAATGGAAGAGAATCTAAGGAACGAAGGGATATGGACCAGGAAGTTTGAGGATTTAATTGAGAGGGTTTTGAGTCTGGGGAATGATGTTGAAATgttgaagaaagaaagaaaaaaagaagcttCTAAAACCCATGTTCAGGGAAGCACAAATTTCATAATACTTGCTGTATTGACCCTGGTGTTAAAAGGAGAATGGCATTTTAGACAGATAGTCCTATCTGTGCTTGTTGTATTATGGGGTCTTCGCTTGGGGCTTTTCCTCTTATTCAGTGGGGACTGGGGAGAGGATCGACGCTTTGATGAGATGCGTAATAATTTGGGAAAATTGGCAGTATTTTGGACATTTCAGGCTGTCTGGGTGTGGACTGTGAGTTTACCTGTTACGGTGGTCAATGCAAGTGACAAAAATCCTTTTCTACAGCCTGAGGATATGGGCTGCGTGTTTAGAGCCATCACAAGCTCATACTATAGAGGAGCCTTGGGAGCCTTACTAGTGTATGACATAACCAGAAGAGCCACCTATGAGAGTGTAAGAAAATGGCTAAGAGAGCTAAGGGAGTATGGGAACCAAGACATGGTGGTCATTCTTGTGGGAAACAAATGTGATCTGAAGGAGTCAAGACaagttgaggaagaagaaggaagagttGTTGCAGAAGAAGAAGGATTGTGCTTCATGGAAACCTCTGCTCTGCAAAACCTCAATGTGGAAGAAGCATTCTTGGAGATGATCACTAAGATTCATGATGTCACCATCCATAAGAGCTTGGAGGCCAAGAGGAATGACACATTAAGCATGAGGATGAATCTTTCCAATGGGAAGGAGATTAGTCTGGATGATGAAGTCACTGCCACTAAACATCAGTCTAATTATTGCTGTTCTAGATGA | 1068 | 0.4082 | MLHKIKADVELKEQSKRGKEAEERHETEEGLLRKSLEDTRKREEEQDKTIKRLRKENCKLMEENLRNEGIWTRKFEDLIERVLSLGNDVEMLKKERKKEASKTHVQGSTNFIILAVLTLVLKGEWHFRQIVLSVLVVLWGLRLGLFLLFSGDWGEDRRFDEMRNNLGKLAVFWTFQAVWVWTVSLPVTVVNASDKNPFLQPEDMGCVFRAITSSYYRGALGALLVYDITRRATYESVRKWLRELREYGNQDMVVILVGNKCDLKESRQVEEEEGRVVAEEEGLCFMETSALQNLNVEEAFLEMITKIHDVTIHKSLEAKRNDTLSMRMNLSNGKEISLDDEVTATKHQSNYCCSR | 355 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto8g4543 | 355 | SMART | ras_sub_4 | 182 | 310 | - | - | |
| Sto8g4543 | 355 | PRINTS | Transforming protein P21 ras signature | 250 | 263 | - | - | |
| Sto8g4543 | 355 | PRINTS | Transforming protein P21 ras signature | 285 | 307 | - | - | |
| Sto8g4543 | 355 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
| Sto8g4543 | 355 | Pfam | Protein of unknown function (DUF1295) | 95 | 203 | IPR010721 | - | |
| Sto8g4543 | 355 | Coils | Coil | 36 | 56 | - | - | |
| Sto8g4543 | 355 | ProSiteProfiles | small GTPase Rab1 family profile. | 95 | 353 | - | - | |
| Sto8g4543 | 355 | SMART | rho_sub_3 | 206 | 310 | IPR001806 | GO:0003924|GO:0005525 | |
| Sto8g4543 | 355 | Pfam | Ras family | 208 | 308 | IPR001806 | GO:0003924|GO:0005525 | |
| Sto8g4543 | 355 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 208 | 319 | IPR027417 | - | |
| Sto8g4543 | 355 | SMART | rab_sub_5 | 195 | 310 | - | - | |
| Sto8g4543 | 355 | PANTHER | SMALL GTPASE SUPERFAMILY, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED | 208 | 354 | - | - | |
| Sto8g4543 | 355 | ProSiteProfiles | small GTPase Ras family profile. | 106 | 355 | IPR001806 | GO:0003924|GO:0005525 | |
| Sto8g4543 | 355 | Gene3D | - | 175 | 347 | IPR027417 | - | |
| Sto8g4543 | 355 | PANTHER | DRAB5-RELATED | 208 | 354 | - | - | |
| Sto8g4543 | 355 | TIGRFAM | small_GTP: small GTP-binding protein domain | 208 | 300 | IPR005225 | GO:0005525 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto8g4543 | Sto-Chr8 | 48044775 | 48047327 | Dispersed/Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto8g4543 | K07976 | - | gmx:100815793 | 202.986 |
Event-related genes