Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4529 ATGGCTGCCCTCTCATTGAAAAGAAACTATCGCTGCGTCCCCGCTCTGCAGCAGTTCTACACCGGTGGACCTTTTGCTGTCTCTTCCGATGGCTCTTTCATCGCCTGTGCATGTGGGGAGTCCATTAAGATCGTCGATTCCTCGAACGCATCCATAAGGTCGACAATTGATGGTGATTCTGAGGCAGTCACAGCGTTGGCTCTTAGCCCAGATGATCAGTTGCTTTTTTCTTCAAGTCACAGTCGACAAATTAGAGTTTGGAATTTATCCACGCTTAAATGTGAGCGTTCTTGGAAGGGTCATGATGGTCCAGTTATGTCAATGTCGTGCCACCCATCTGGGGGATTACTTGCTACAGGAGGAGCTGACAAAAAGGTCCTTGTTTGGGATGTTGATGGTGGCTTCTGCACTCATTACTTTACGGGTCACAGAGGAGTTGTGTCTAGTATTTTGTTCCATCCTGATCCAGAGAAACAGCTTCTTTTTTCTGGGAGTGATGATGGTGGCGATCATGCAACTGTACGGGTTTGGGATATTTCTAAGGCCAAGAGGAAGAAGTGCATTGCAACACTAGATAATCATCGCTCTGCAGTGACTTCTTTGGCTGTGTCTGAAGATGGATGGACATTGCTTAGTGCTGGAAGAGATAAGGCAGGCTGCTCAATCTTATCCAACAAGAAGACTGTCGTCACAAATGAGGCAATTGAAGCTGTATGTGTAATAGGTCCAGGGAGCCCTTTTGCTTCATCTCTGGATTTACACAATAAGCAGAGTTCAAAGAAACGAGGTGGTTCACAAGCAATCAAGTTTGTTACAGTTGGTGAACGTGGCATTGTACGCATATGGAGTTCTGAAGGTGCAGGTTGCCTGTTTGAGCAAAAGACCTCAGATGTTTCAGTTAGCACAGATGAGGATGGATTGCAAAGGGGATTCACTGCTGCTGCTATGCTTACCTCAGATCAAGGATTGCTTTGTGTGACTGCAGATCAGCAgtttcttttctattctctGGAATACAGCGGCGAAGTTTTGCAGTTAGACCTGACCAAAAGGCTTGTAGGATATAATGAAGAGATTGTGGATATGAAGTTTTTGGGGGATGATGAAAAATACCTTGCTCTCGCTACCAATCTTGAACAGTGTTTATTTGTAAAACTGGCCTCAAATGCTACATTGCAGAGTATTTGTGCAATACCTAGGGATGCTTTTCATATGGAAACCTTCTATGATTCACAAAGGAACAAGGTACGGGTTTATGACCTTGCATCCATGTCTTGTTCCTATGTCTTAGCTGGACATACTGAAATTGTTCTATGCCTTGACACCTGTGTATCAAGTTCTGGAAGAACACTGATAGTTACTGGAAGTAAAGACAACAGTGTTAGGTTGTGGGAATCAGAAAGCAGAAGCTGCCTCGGAGTAGGCATAGGCCATATGGGTGCTGTTGGAGCTGTTGCCTTCTCAAAAAGAAAGCGAGACTTTTTTGTTAGTGGTAGTAGTGATCATACACTAAAGGTGTGGAGTATGGATGGCCTCTCAGACAATATGGAACTGCCTAATAGTTTAAAAGCAAAAGCTGTTGTGGCAGCTCATGACAAAGATATTAATTCTGTAGCTATTGCTCCAAATGATAGTTTAGTATGTAGTGGTTCTCAGGATCGCACAGCTTGTATCTGGAGACTCCCAGATCTTGTATCAGTAGTTGTTCTCAAAGGGCATAAAAGGGGAGTTTGGTCTGTAGAGTTTTCTCCAGTTGACCAGTGTGTCCTAACAGCATCTGGTGATAAGACAATAAGGATATGGGCTATATCTGATGGCTCGTGTTTGAAGACATTTGAAGGGCACACTTCAAGTGTTTTAAGAGCATCATTTCTTACTCGTGGGACACAATTTGTTTCATGTGGTGCTGATGGGTTAGTAAAGCTGTGGACAGTAAAAAGTAATGAATGCGTTGCTACTTATGATAATCATGAAGACAAGGTTTGGGCGTTGGCTGTTGGTAGGAAGACAGAAATGCTTGCCACTGGTGGCAGTGATGCTGTTGTCAATTTATGGTTTGATTCCACTGCATCTGACAAAGAAGAAGCTTTTCGTAAAGAGGAAGAGGGTGTTTTGAAAGGACAAGAACTAGAGAATGCTGTCTCAGATGCTGACTATACTAAAGCAATCCAAATTGCATTTGAACTGCGAAGGCCCCGTAAACTTTTTGAGTTACTTGCAGAACTTTGCAGGAAGAGAGAAGCTGAGGATCGTATAGACAGAGCCCTTAAGgctctggaaaaggaagagtTGCGTATACTATTTGACTATGTTCGAGAATGGAACACAAAACCAAAGCTCTGTTATGTTGCACAATTTGTGCTTTACAGAGTTTTCAATATCTTTCCTCCGACAGATATAATTCAGATGAAAGGCATAAAGGAAATTCTTGAAGGTCTTATTCCATACACTCAAAGGCACTATAGTAGGATAGACAGACTTGTTAGAAGCACATTCTTGTTAGACTACACTTTATCAGGAATGTCAGTTATCGAACCAGAACCTCAAAAGACAGAATCAAAGGTTGACTCTTTGTTGCATTCAGAGGAAGAACATGCTATTGAGGAGCAAGATCACGCTGAAGAAAAAGCTTCTTCCAAAAAAAGGAAatcaaaaaaatcaaaacatgaGGTTCTCGAGGTTTCCGCCGCTTCAATCATACTCTACAACAAGTGCTCCCACCCCGTTTGGCCCGGCATCCAACCCAGCGCCGGAAAGCCCATCCTCGCTCGCGGAGGCTTCAAGCTCCCTCCAAACAAGGCCTACTCCCTCCGCCTCCCCCCTCTCTGGTCCGGCCGCTTCTGGGGCCGCCACGCCTGCGCCTTCGACGCCTCCGGACGCGGCCGCTGCGCCACCGGCGACTGCGGCGGCGCTCTCTTCTGCAACGGCATCGGCGGCACTCCTCCGGCCACCCTCGCCGAGTTCACCCTCGGCAACGACCAGGACTTCTACGACGTCAGCCTCGTCGACGGCTACAACCTCCCCATCTCCATCACTCCCTTCAAGGGCTCCGGCAAGTGCAGCTACGCCGGATGCGTGAGCGATCTCAACCTAATGTGTCCCGTGGGCCTGCAGGTCCGGGCCCACGATAAACGGGTCGTGGCCTGCAAGAGTGCCTGCTCGGCTTTCAATTCCCCTCGGTATTGCTGTACGGGAAGCTACGGAAGCCCACAGGCCTGCAAGCCCACGGCGTATTCTAGAATCTTCAAGACCGCTTGCCCTAAAGCCTACTCTTATGCTTATGATGACCCTACTAGTATCGCTACCTGCACTAAAGCCAGCTATTTGGTCACTTTCTGCCCTCGCCGTCGTTGA 3354 0.4595 MAALSLKRNYRCVPALQQFYTGGPFAVSSDGSFIACACGESIKIVDSSNASIRSTIDGDSEAVTALALSPDDQLLFSSSHSRQIRVWNLSTLKCERSWKGHDGPVMSMSCHPSGGLLATGGADKKVLVWDVDGGFCTHYFTGHRGVVSSILFHPDPEKQLLFSGSDDGGDHATVRVWDISKAKRKKCIATLDNHRSAVTSLAVSEDGWTLLSAGRDKAGCSILSNKKTVVTNEAIEAVCVIGPGSPFASSLDLHNKQSSKKRGGSQAIKFVTVGERGIVRIWSSEGAGCLFEQKTSDVSVSTDEDGLQRGFTAAAMLTSDQGLLCVTADQQFLFYSLEYSGEVLQLDLTKRLVGYNEEIVDMKFLGDDEKYLALATNLEQCLFVKLASNATLQSICAIPRDAFHMETFYDSQRNKVRVYDLASMSCSYVLAGHTEIVLCLDTCVSSSGRTLIVTGSKDNSVRLWESESRSCLGVGIGHMGAVGAVAFSKRKRDFFVSGSSDHTLKVWSMDGLSDNMELPNSLKAKAVVAAHDKDINSVAIAPNDSLVCSGSQDRTACIWRLPDLVSVVVLKGHKRGVWSVEFSPVDQCVLTASGDKTIRIWAISDGSCLKTFEGHTSSVLRASFLTRGTQFVSCGADGLVKLWTVKSNECVATYDNHEDKVWALAVGRKTEMLATGGSDAVVNLWFDSTASDKEEAFRKEEEGVLKGQELENAVSDADYTKAIQIAFELRRPRKLFELLAELCRKREAEDRIDRALKALEKEELRILFDYVREWNTKPKLCYVAQFVLYRVFNIFPPTDIIQMKGIKEILEGLIPYTQRHYSRIDRLVRSTFLLDYTLSGMSVIEPEPQKTESKVDSLLHSEEEHAIEEQDHAEEKASSKKRKSKKSKHEVLEVSAASIILYNKCSHPVWPGIQPSAGKPILARGGFKLPPNKAYSLRLPPLWSGRFWGRHACAFDASGRGRCATGDCGGALFCNGIGGTPPATLAEFTLGNDQDFYDVSLVDGYNLPISITPFKGSGKCSYAGCVSDLNLMCPVGLQVRAHDKRVVACKSACSAFNSPRYCCTGSYGSPQACKPTAYSRIFKTACPKAYSYAYDDPTSIATCTKASYLVTFCPRRR 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4529 1117 Coils Coil 745 765 - -
Sto8g4529 1117 Pfam Thaumatin family 903 1114 IPR001938 -
Sto8g4529 1117 CDD WD40 426 685 - -
Sto8g4529 1117 ProSiteProfiles Thaumatin family profile. 896 1114 IPR001938 -
Sto8g4529 1117 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 475 510 - -
Sto8g4529 1117 ProSiteProfiles Trp-Asp (WD) repeats profile. 475 510 IPR001680 GO:0005515
Sto8g4529 1117 ProSiteProfiles Trp-Asp (WD) repeats profile. 612 653 IPR001680 GO:0005515
Sto8g4529 1117 SUPERFAMILY WD40 repeat-like 52 512 IPR036322 GO:0005515
Sto8g4529 1117 MobiDBLite consensus disorder prediction 865 880 - -
Sto8g4529 1117 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 570 607 - -
Sto8g4529 1117 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 98 132 - -
Sto8g4529 1117 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 528 561 - -
Sto8g4529 1117 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 612 649 - -
Sto8g4529 1117 Gene3D - 269 514 IPR015943 GO:0005515
Sto8g4529 1117 SUPERFAMILY Osmotin, thaumatin-like protein 899 1114 IPR037176 -
Sto8g4529 1117 Gene3D - 515 706 IPR015943 GO:0005515
Sto8g4529 1117 PRINTS Pathogenesis-related protein signature 898 910 IPR001938 -
Sto8g4529 1117 PRINTS Pathogenesis-related protein signature 946 957 IPR001938 -
Sto8g4529 1117 PRINTS Pathogenesis-related protein signature 959 988 IPR001938 -
Sto8g4529 1117 PRINTS Pathogenesis-related protein signature 995 1011 IPR001938 -
Sto8g4529 1117 PRINTS Pathogenesis-related protein signature 1104 1113 IPR001938 -
Sto8g4529 1117 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 56 91 - -
Sto8g4529 1117 ProSitePatterns Trp-Asp (WD) repeats signature. 117 131 IPR019775 -
Sto8g4529 1117 Gene3D - 24 257 IPR015943 GO:0005515
Sto8g4529 1117 ProSiteProfiles Trp-Asp (WD) repeats profile. 56 97 IPR001680 GO:0005515
Sto8g4529 1117 ProSiteProfiles Trp-Asp (WD) repeats profile. 98 132 IPR001680 GO:0005515
Sto8g4529 1117 SMART tha2 899 1114 IPR001938 -
Sto8g4529 1117 MobiDBLite consensus disorder prediction 865 887 - -
Sto8g4529 1117 SUPERFAMILY WD40 repeat-like 411 685 IPR036322 GO:0005515
Sto8g4529 1117 ProSiteProfiles Trp-Asp (WD) repeats profile. 528 561 IPR001680 GO:0005515
Sto8g4529 1117 PRINTS G protein beta WD-40 repeat signature 117 131 IPR020472 -
Sto8g4529 1117 PRINTS G protein beta WD-40 repeat signature 452 466 IPR020472 -
Sto8g4529 1117 PRINTS G protein beta WD-40 repeat signature 495 509 IPR020472 -
Sto8g4529 1117 ProSiteProfiles Trp-Asp (WD) repeats profile. 570 611 IPR001680 GO:0005515
Sto8g4529 1117 ProSiteProfiles Trp-Asp (WD) repeats profile. 430 474 IPR001680 GO:0005515
Sto8g4529 1117 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 654 685 - -
Sto8g4529 1117 CDD WD40 53 508 - -
Sto8g4529 1117 ProSitePatterns Thaumatin family signature. 959 974 IPR017949 -
Sto8g4529 1117 Pfam WD domain, G-beta repeat 136 178 IPR001680 GO:0005515
Sto8g4529 1117 Pfam WD domain, G-beta repeat 569 601 IPR001680 GO:0005515
Sto8g4529 1117 Pfam WD domain, G-beta repeat 425 464 IPR001680 GO:0005515
Sto8g4529 1117 Pfam WD domain, G-beta repeat 606 643 IPR001680 GO:0005515
Sto8g4529 1117 Pfam WD domain, G-beta repeat 58 88 IPR001680 GO:0005515
Sto8g4529 1117 Pfam WD domain, G-beta repeat 93 130 IPR001680 GO:0005515
Sto8g4529 1117 Pfam WD domain, G-beta repeat 470 508 IPR001680 GO:0005515
Sto8g4529 1117 Pfam WD domain, G-beta repeat 529 559 IPR001680 GO:0005515
Sto8g4529 1117 Pfam WD domain, G-beta repeat 649 685 IPR001680 GO:0005515
Sto8g4529 1117 Gene3D Thaumatin 897 1114 IPR037176 -
Sto8g4529 1117 CDD TLP-PA 898 1113 - -
Sto8g4529 1117 SMART WD40_4 423 465 IPR001680 GO:0005515
Sto8g4529 1117 SMART WD40_4 49 88 IPR001680 GO:0005515
Sto8g4529 1117 SMART WD40_4 133 178 IPR001680 GO:0005515
Sto8g4529 1117 SMART WD40_4 563 602 IPR001680 GO:0005515
Sto8g4529 1117 SMART WD40_4 521 560 IPR001680 GO:0005515
Sto8g4529 1117 SMART WD40_4 468 508 IPR001680 GO:0005515
Sto8g4529 1117 SMART WD40_4 91 130 IPR001680 GO:0005515
Sto8g4529 1117 SMART WD40_4 647 686 IPR001680 GO:0005515
Sto8g4529 1117 SMART WD40_4 184 224 IPR001680 GO:0005515
Sto8g4529 1117 SMART WD40_4 605 644 IPR001680 GO:0005515
Sto8g4529 1117 PANTHER BNAC02G06840D PROTEIN 414 889 - -
Sto8g4529 1117 PANTHER BNAC02G06840D PROTEIN 1 386 - -
Sto8g4529 1117 Pfam Utp13 specific WD40 associated domain 708 841 IPR013934 GO:0006364|GO:0032040
Sto8g4529 1117 ProSiteProfiles Trp-Asp (WD) repeats profile. 654 685 IPR001680 GO:0005515
Sto8g4529 1117 PANTHER TRANSDUCIN BETA-LIKE 3 1 386 - -
Sto8g4529 1117 PANTHER TRANSDUCIN BETA-LIKE 3 414 889 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4529 Sto-Chr8 47965203 47983458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4529 894 1115 Receptor kinase-like Gene Family AT5G38280 44.783 3.95e-57 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4529 K14555 - gmx:100783244 1395.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g4529 8 47965203 47983458 Sto8g4529 8 47965203 47983458 ECH