Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4525 ATGGCGTCTCAATCCGCCAATTTGTGGGTTCTATTGGGATTGGGTTTGGCTGGAATCCTGCTTATGACCAGAAAGCTCAAGAAGACTATCAAAGAAGATTTTGGCGCTTTTGTCGAGAAGCTTCAGCTACTTCCTCCGCCGCAGCCTGCTCCCCCTAAAGCTCCTCACCCGCTCACTGGCCTCACTTTTGCCGTTTCCGACGTATTTGACATAGACGGACATGTTACTACGTTTGGACATCCAGACTGGGAAAGGACGCACGAATCTGCTTCTCAGACTTCTGCTGCCGTTTCTTCTCTTGTTGAAGGAGGTGCAACTTGCATTGGGAGAACTGTTGTGGATGAACTAGCATATGGTATCAGTGGTGAAAACAAGCATTATGGAACACCAACCAATCCTGCTATACCTGATCGTGTACCAGGTGGCTCGTCTAGCGGTGCTGCTGTGAGTGTTGCTGCTAATTTGGTTGATTTTTCCCTGGGTCTTGATACTGTTGGAGGGGTAAGAGTACCTGCTGGATTTTGTGGCATACTAGGATTTCGACCTTCATATGGGGCTGTCTCTCACATGGGAATCATACCTGTTTCAACAAGCCTGGACACTGTTGGTTGGTTTGCAAAGGATCCTAATATTTTGCGTCGTGTTGGCAATATACTTCTGCAAGCATCATTCGTTCAACGTAATCCTCGACAAATTATAATAGCAGATGATTGTTTTCAACATCTAAATGTGCCTCTTGACAAGAGTTCTCAGGTGGTGATTAAATCAACCGAGAAGCTTTTTGGAAGGCAAGTATTGAAGCATATGAATCTTGCGGACTATTTAAGTTCTAAAGTTCCTAGCTTGAAAGAGATCCCCAACCAGAAAGCAAATGGTGAACTCAAGGCTTCTTCACTAATTTTACTTGCCAACGTTATGCAGATTCTTGAGAGACATGAATTCAAACTTAAACATGAGGAGTGGCTGAACACAGTAAAACCTACTCTTCATCCTGCTATCTCAGCTCAATTGCATGAAAATTGTGAGTTATCAGACGTAGATATCGAAAACTGTAAATCTGTCAGAAATGAGATGCGTGCTGCTATCAATTCTCTTCTGAAGGATGAAGGAGTTTTAGTGATCCCTACTGTAGCTGATCCTCCTGCAAAATTGGGTGGGAAGGAGACCTTGTCGGAGGACTATCGTAGCCGTGCATATAGTTTGCTAAGTATTGCGAGCATATCAGGTTGCTGTCAGGTTACAATTCCACTAGGATTTCATGAAAAGTGTCCTGTTTCAGTGTCTTTGATAGCTCGGCATGGTGGTGATCGCTTCTTATTGGACACTCTACAAACCATGTATACAACTCTCCAAGAGCAGGCTGAAATTGCTGCCAAAACTAAATCATCAAGAAATGTTGTCAGTCGCGAAGAATCTGCAGAAATTGCCAAAGAGAAGGGAAATCAAGCATTCAAAGATAAGCAGTGGCAGAAAGCCATTGGATTTTATACAGAAGCTATAAAACTCAGTGGTAATAATGCAACATACTACAGTAACAGAGCTGCGGCATATCTTGAACTTGGAAGTTTCATTCAAGCTGAGGCGGACTGTACAAAAGCAATTAGTCTTGACAAAAAGAATGTGAAGGCCCATTTCCGAAGAGGTACAGCAAGAGAGATGCTAGGCTACTACAAGGGGGCAATTGATGATTTTAAATATGTCCTTGTTCTTGAGCCAACAAACAAAAGGGCAGCTACATCTGCTGAAAGGTTGAGGACACTATTCCAGTAG 1770 0.4328 MASQSANLWVLLGLGLAGILLMTRKLKKTIKEDFGAFVEKLQLLPPPQPAPPKAPHPLTGLTFAVSDVFDIDGHVTTFGHPDWERTHESASQTSAAVSSLVEGGATCIGRTVVDELAYGISGENKHYGTPTNPAIPDRVPGGSSSGAAVSVAANLVDFSLGLDTVGGVRVPAGFCGILGFRPSYGAVSHMGIIPVSTSLDTVGWFAKDPNILRRVGNILLQASFVQRNPRQIIIADDCFQHLNVPLDKSSQVVIKSTEKLFGRQVLKHMNLADYLSSKVPSLKEIPNQKANGELKASSLILLANVMQILERHEFKLKHEEWLNTVKPTLHPAISAQLHENCELSDVDIENCKSVRNEMRAAINSLLKDEGVLVIPTVADPPAKLGGKETLSEDYRSRAYSLLSIASISGCCQVTIPLGFHEKCPVSVSLIARHGGDRFLLDTLQTMYTTLQEQAEIAAKTKSSRNVVSREESAEIAKEKGNQAFKDKQWQKAIGFYTEAIKLSGNNATYYSNRAAAYLELGSFIQAEADCTKAISLDKKNVKAHFRRGTAREMLGYYKGAIDDFKYVLVLEPTNKRAATSAERLRTLFQ 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4525 589 Pfam Amidase 55 440 IPR023631 -
Sto8g4525 589 SUPERFAMILY Amidase signature (AS) enzymes 18 443 IPR036928 -
Sto8g4525 589 Gene3D Tetratricopeptide repeat domain 445 587 IPR011990 GO:0005515
Sto8g4525 589 SMART tpr_5 507 540 IPR019734 GO:0005515
Sto8g4525 589 SMART tpr_5 541 574 IPR019734 GO:0005515
Sto8g4525 589 SMART tpr_5 473 506 IPR019734 GO:0005515
Sto8g4525 589 Gene3D Amidase signature (AS) domain 46 444 IPR036928 -
Sto8g4525 589 SUPERFAMILY TPR-like 471 578 IPR011990 GO:0005515
Sto8g4525 589 PANTHER AMIDASE 1 1 589 - -
Sto8g4525 589 PANTHER OUTER ENVELOPE PROTEIN 64, CHLOROPLASTIC 1 589 - -
Sto8g4525 589 ProSiteProfiles TPR repeat profile. 541 574 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4525 Sto-Chr8 47923052 47934271 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4525 31 446 Acyl Lipid Metabolism Gene Families AT1G08980 51.544 7.70e-148 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4525 - - gmx:100786059 932.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g4525 8 47923052 47934271 Sto8g4525 8 47923052 47934271 ECH