Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4513 ATGCGTCCACCATCTCTTACCTGCAAATCCCTTCTCTGTCtcctcctcttctctctctatcctctctctctcaccgCCCGCCCCTTTGTCCTCGTCCTCTCTCAGGATGACCTCAAAGACGCTCCCGCCTCCGCCGACGATCCCACCGCCGATCCCGACGCTACGGCGGAGTGGGACGAGTTTGGTGACTCCGACTCCCACAAGTCCGAAGAGGAGCTCGATCCGGGATCATGGCGCCCCATCTTCGAGTCGGATTCAGCTGCCACTAGTGCCGAATCTGGCAACGAGTCCGAGGCGCTCTACTACTCCGGCGTGAGAAATATAATGTCGGCGGTTAGCTCCGGTGATGTGAGGTTGATGGAGGAGGCGTCCGGGGAGATCGAGGCGGCTGTTAAGTTGGGGTACCCAGCGGCGCAGTCAGTGCTTGGGTTTTTGTTTGGGATGGGACTTATGAGAGAGAGGAGCAAAGCAAAAGCATTTCTGTATCATCACTTTGCTGCGGAGGCTGGTAATATGCAGTCCAAGATGGCTTTGGCTTATATTTACAGACGCCAAGATATGTATGATAAAGCTGTTAAGCTTTACGCAGAATTAGCAGAAGTAGCTGtaaatagttttttaatttcaaaagatTCCCCAGTCATTGAACCAGTTAGGCTCCATAATGGAGCTGAGGAAAATAAAGAAGCTCTGAGAAAATCTAGAGGCGAGGAGGATGAAGACTTTCAGATACTGGAATATCAAGCGCAGAAAGGGAATGCCGGAGCAATGTACAAAATTGGTCTGTTTTACTACTTTGGGCTGCGAGGATTAAGACGTGATCATTCCAAGGCACTGTCATGGTTTTTGAAGGCTGTGGACAAGGGGGAGCCAAGGTCAATGGAACTTCTGGGAGAGATATATGCTAGGGGAGCAGGTGTTGAAAGAAACTACACTAAAGCTCTTGAGTGGCTCACACTTGCATCAAAACAGCAACTATACTCAGCTTATAATGGGATGGGATATTTGTATGTAAAAGGATATGGAGTGGAGAAGAAGAATTACACAAAAGCcaaagaatattttgaaaaggCTGCTGATAACGAAGAGGTTGGTGGACACTATAACCTTGGTGTTATGTATCTCAAAGGGATTGGGGTAAAAAGAGATGTGAAATTGGCATGTAAGTACTTCATAGTGGCTGCTAACAATGGTCAACCAAAGGCATTTTACCAGCTAGCAAAGATGTTTCATACTGGTGTTGGGCTCAAGAAGAATATTCCCATGGCCACTGCACTGTACAAACTAGTCGCAGAGCGAGGTCCCTGGAATTCTTTGTCCAGGTGGGCACTCGAAGCCTACTTAAAAGGTGATGTCGGTAAGGCATTTATGCTGTATTCAAGAATGGCAGAGATGGGATATGAGGTGGCACAAAGTAATGCTGCTTGGATTCTTGACAAATATGGGGAAAGTAGCATGTGCATGGGTGAATCTGGATTTTGCACAGATGCAGAGAGGCATCAGCGTGCACATTCTCTATGGTGGCAGGCTTCCGAGCAGGGTAATGAACATGCTGCCTTACTTATTGGAGATGCTTATTACTATGGTCGGGGTACTTCCAGGGATTATGAACGGGCTGCTGAGGCCTACATGCATGCCAAATCTCAATCTAATGCACAAGCGATGTTCAATCTTGGGTACATGCATGAGCACGGCCAAGGACTTCCATTTGATCTTCATCTGGCCAAGCGGTACTATGATGAAGCTCTAGAGCATGATCCTGCAGCAAAGTTGCCAGTCACACTTGCCCTTGCAAGTTTGTGGGTTCGTAAGAACTATGCTGACAgttttttgGTGGACATGATTGATTCACTGCCTGAATTTTACCCAAAATTGGAAGCATGGGTGGAGGATGTGCTTTTGGAAGAGGGGAATGCAACAATTCTCACTCTCTTTGCTTGTCTCCTAACTGTACTATATCTCCGTGAGAGGCAAAGAAGAAATGCTGCTGTTGCAGCTGGAGATTTGGCTCAGCCACCTCAACCTAATGACCATGGTGTGCCTGTGCCCAATTAA 2055 0.4589 MRPPSLTCKSLLCLLLFSLYPLSLTARPFVLVLSQDDLKDAPASADDPTADPDATAEWDEFGDSDSHKSEEELDPGSWRPIFESDSAATSAESGNESEALYYSGVRNIMSAVSSGDVRLMEEASGEIEAAVKLGYPAAQSVLGFLFGMGLMRERSKAKAFLYHHFAAEAGNMQSKMALAYIYRRQDMYDKAVKLYAELAEVAVNSFLISKDSPVIEPVRLHNGAEENKEALRKSRGEEDEDFQILEYQAQKGNAGAMYKIGLFYYFGLRGLRRDHSKALSWFLKAVDKGEPRSMELLGEIYARGAGVERNYTKALEWLTLASKQQLYSAYNGMGYLYVKGYGVEKKNYTKAKEYFEKAADNEEVGGHYNLGVMYLKGIGVKRDVKLACKYFIVAANNGQPKAFYQLAKMFHTGVGLKKNIPMATALYKLVAERGPWNSLSRWALEAYLKGDVGKAFMLYSRMAEMGYEVAQSNAAWILDKYGESSMCMGESGFCTDAERHQRAHSLWWQASEQGNEHAALLIGDAYYYGRGTSRDYERAAEAYMHAKSQSNAQAMFNLGYMHEHGQGLPFDLHLAKRYYDEALEHDPAAKLPVTLALASLWVRKNYADSFLVDMIDSLPEFYPKLEAWVEDVLLEEGNATILTLFACLLTVLYLRERQRRNAAVAAGDLAQPPQPNDHGVPVPN 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4513 684 SMART sel1 327 363 IPR006597 -
Sto8g4513 684 SMART sel1 291 326 IPR006597 -
Sto8g4513 684 SMART sel1 364 399 IPR006597 -
Sto8g4513 684 SMART sel1 552 587 IPR006597 -
Sto8g4513 684 SMART sel1 400 435 IPR006597 -
Sto8g4513 684 SMART sel1 254 290 IPR006597 -
Sto8g4513 684 SMART sel1 516 551 IPR006597 -
Sto8g4513 684 SMART sel1 136 171 IPR006597 -
Sto8g4513 684 SUPERFAMILY HCP-like 235 346 - -
Sto8g4513 684 MobiDBLite consensus disorder prediction 40 79 - -
Sto8g4513 684 Gene3D Tetratricopeptide repeat domain 330 445 IPR011990 GO:0005515
Sto8g4513 684 PANTHER ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE COMPONENT HRD3A-RELATED 8 666 - -
Sto8g4513 684 SUPERFAMILY HCP-like 120 201 - -
Sto8g4513 684 SUPERFAMILY HCP-like 345 475 - -
Sto8g4513 684 Gene3D Tetratricopeptide repeat domain 88 212 IPR011990 GO:0005515
Sto8g4513 684 Gene3D Tetratricopeptide repeat domain 446 609 IPR011990 GO:0005515
Sto8g4513 684 SUPERFAMILY HCP-like 447 588 - -
Sto8g4513 684 PANTHER ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE COMPONENT HRD3A-RELATED 8 666 IPR044623 GO:0030433
Sto8g4513 684 MobiDBLite consensus disorder prediction 60 78 - -
Sto8g4513 684 Pfam Sel1 repeat 136 171 IPR006597 -
Sto8g4513 684 Pfam Sel1 repeat 404 434 IPR006597 -
Sto8g4513 684 Pfam Sel1 repeat 518 540 IPR006597 -
Sto8g4513 684 Pfam Sel1 repeat 328 361 IPR006597 -
Sto8g4513 684 Pfam Sel1 repeat 292 324 IPR006597 -
Sto8g4513 684 Pfam Sel1 repeat 552 586 IPR006597 -
Sto8g4513 684 Pfam Sel1 repeat 449 467 IPR006597 -
Sto8g4513 684 Pfam Sel1 repeat 367 398 IPR006597 -
Sto8g4513 684 Pfam Sel1 repeat 255 289 IPR006597 -
Sto8g4513 684 Gene3D Tetratricopeptide repeat domain 218 329 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4513 Sto-Chr8 47836681 47842610 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4513 K14026 - rcu:8283119 1122.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g4513 8 47836681 47842610 Sto8g4513 8 47836681 47842610 ECH