Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4503 ATGGTGATTGTCACCGGAGATCGGTACCTGGAGAAGTTGGTCAAGTTCGTGGACGAGCAAGCGGGTCCTCTCATTGAAGGGACTCTGGTTCTGAAGCTCAATCCTGCCGGCCTTCACTATGTGCAATCCAGGCTTGAGGCGTTGCATGAGCTCGAGAGCCTTCTTGCGGGAGCGCCCGTTGACTACCTGAGAGCTTATGTGTCTGACCTTGGTGATCACCGAGCGCTTGAGCAGCTCCGGAGGATTCTCCGGCTTCTCACGTCGCTCAAGGTCGTTTCTGTCTTGCCACTGCCGGCGAGGGATCCCACGCCCTTGTCTTTCTTGCCTTTTGGCCGGTTGAAGGTTTTGGAGCTCAGGGGATGTGACTTGTCCACTTCCGCTGCTAAGGGGTTGCTCGAGTTGAGGCATACTTTGGAGAAAATCATTTGTCATAATTCTACGGATGCTCTGCGGCATGTATTTGCGAGCAGGATAGCTGAAATAAAGGATTCTTCGCAGTGGAATCGGTTGTCATTTGTCTCTTGTGCATGTAATGGTTTGGTTCTCATGGATGAATCTTTGCAACTTCTTCCTGCAGTTGAAACACTTGACCTTAGCAGGAACAAGTTTGCTAAGATAGATAATCTTCGTAAGTGTACAAAATTGAAGCACTTGGACCTTGGTTTCAATCACCTGAGAACAATTGCACCATTCAATAAGGTTTCCTGTCATATTGTTAAACTAGTTTTGAGGAACAATGCTCTAACTACGTTGCGTGGGATTGAGAATTTGAAGTCACTTGAAGGACTTGATGTTTCCTACAATATTATTTCCAATTTTTCAGAGCTACAGCTCCTTGCGAGCCTTCCTTTTCTTCAGAGCCTGTGGTTGGAAGGAAATCCTTTGTGCTGTGCTCGTTGGTATAGAGCACAAGTATTCAGCTTCTTTGCCTACCCTGAAAAATTGAAGTTAGATGACAAGGAAATCAATGCCGACGATTTTTGGAAGAGACAAATAATTATTGCCAGCAAGCATAAGAGACCTTCCAGCTTTGGGATTTATTTACCTGCAAAGGATGAGGATATTGAGGAGGGGAGCTTAAATAGAAGGAGAAAGGCTTCTCGTCTCGCCTATATTGAGAATGAAGAAGATATAACTAGCATATGTTCTGACCGGGAGTCTATGTCATGTGGGAATGACATTCAAAATAGAGATGATCCTGATTTATCTGATGGTGAAGCTAAAATAGTAGATTTGATAGATAGAgttgagaaaatgaagaaagagCGTTCTATTCTTTGGTTGCGGGAATTTAAGGAGTGGATGGATATAGCTTCTGGTAAATTTGTGGATAGCAGCAAAGAATGCAGATCTATATTGCATcctcaaaaagaaaattgtataaaaaacaGGCCAAGCCAGGGGCAGAAGATTGAAGTCTCAAGATATGCCTCAGACTCTGTTCTGGCCTCAGGAGATGAAAGTAGTTTGAATATTGTAGAGTCTGATAGTTCTTTTGTTGATACATCTGTTGGTTTTCATAACCAGCAGAACTTTGACTGTAGAGGTTTGCTTGGTAATGCTAGTGGGGCTCTTGCTGATTCAGCGGAAGTGGTTCAGGACTATCCTAAATCTGGTTTGCTTAAAGGGATTAGCAGTGCATTCTCACACTCTAAAAGTTCCCGTTTTGACGGTTGTACCATCCAAGAAGCACATAGAATAGCTAAAAATGGTGACCTATCACCATTGTCCACAATTGGTGATATTTCTGGATCTTTTTCATCCTCTGCGTGCCTCCCATCTCCCCCTCATTTTCAAGAAGGCCTTTTTCAACGTCGACAAAACTTGGTGGAGGAAATTATGCAGCTATCTGCAGATTCGTTTTCAGTGGCATCTTCTGATAGTAACACAAGCTGTAGTGAAGTTGATTACTCTGATAATGAGCAATCAGTGCCTGAAATTGATAATTTCCTTTCTAAAAAATATGTCAACGAGAGTGTTGATGAGCATATATCTCTAAACCTACCCAAGGACAAATTTAATGACCAAAGCAAAGGAGTTATTCATGTAAGAGAGAATGGTATTAATTCCTTTGATTTATCTGCTGACCAAACTTCTAAACAGTGTTCCAATGATTTTAATGCTGGTGATGACAATGGTGAGAGTTCTTATTTTGTTAACCAAGATGCTCATCACTTAATGAATAGAAAAAGCAGAAAGAAAGCCAAGAAAAGATTTATTTCAATATTAGAAGAGAGTTCAAATGGCAATGCGTGCAATCAAGATTTTGATATTGTGGGTAAAAGACAGATTTCTGCAAATTGCAAGAGAAAGTTGGATGTTGATGATGCTTCTGAATTGTCGGTATCTTATTGCTGCAACCAAGACAACAATGATTTGATTGTCAACTATTTCAATACAAATATTGCTGATTCAGAAGCTCATGAAATCTGTCGTCATTGCGTGCGCTGTAATTGTGTCCTTCAGAGGGAGCCCACCTACAAGGAAAGAGAAGTTGCAGTGTTGCTTAGCAGCCATATGAAGCTCTATCTACTACTAATCACTGCTGCAACTGATGAGTCAGGAACTCTTTTGAGTTTGTTAAGTAGCCACAAGGCAGAAGAAGTTTGTGAAGTGCTTGTTGGAATGGGACTTCAGGTTGTAAGGgtgaattttgaaattggtgAAACATACCTTTTTATAACAAGGAGCATAGAGAAATCAAGAGAGTTACTATGGACCTTGCAGGTTTCTGATTTATGTGGAGAAAATGATAAATGTTCAATAAGAAGTTTGGAGCAGGTTCAGGTTGATTTGTTTGACAACCAAATATGTGGTGGTTCAAGTGTGAGCATTTATCAATACGCAATGGTGCTCGTTTGTTGTAATGACAGCAAAGAGGAATCATGGCTTTCAAGATCACTTTTTGTGATTGGAGGATATGTGCTTATATGCATTGAGGATGTCATGCAGTTATGTTCATTTTCCTCAGATGTGTCTCTATCTCCATATTTCAGAATTGATTCATGTTGCTCCATTACTGACATTTGTGAGGCGttacttAATCTCAACGTCCTCCAGGTTATTGAGGTTAAAGAACGCTTCTTGGTGACTTTAGTTCTGGTCACCTCTACCCAAGCTAACGTTGAAGTTGTAAATAATGGAAGCACAGTTTCAAGATCTATAAGATTGAAGATTCAGTGGTTCTCCAGAGATAATATGTTGAATTTCGTTTCATTGCTGAAGGCAATCCATGAAGAAAAAATGGGCTCTGGTTTGGTAGTAAGATGTATATCATAA 3279 0.4013 MVIVTGDRYLEKLVKFVDEQAGPLIEGTLVLKLNPAGLHYVQSRLEALHELESLLAGAPVDYLRAYVSDLGDHRALEQLRRILRLLTSLKVVSVLPLPARDPTPLSFLPFGRLKVLELRGCDLSTSAAKGLLELRHTLEKIICHNSTDALRHVFASRIAEIKDSSQWNRLSFVSCACNGLVLMDESLQLLPAVETLDLSRNKFAKIDNLRKCTKLKHLDLGFNHLRTIAPFNKVSCHIVKLVLRNNALTTLRGIENLKSLEGLDVSYNIISNFSELQLLASLPFLQSLWLEGNPLCCARWYRAQVFSFFAYPEKLKLDDKEINADDFWKRQIIIASKHKRPSSFGIYLPAKDEDIEEGSLNRRRKASRLAYIENEEDITSICSDRESMSCGNDIQNRDDPDLSDGEAKIVDLIDRVEKMKKERSILWLREFKEWMDIASGKFVDSSKECRSILHPQKENCIKNRPSQGQKIEVSRYASDSVLASGDESSLNIVESDSSFVDTSVGFHNQQNFDCRGLLGNASGALADSAEVVQDYPKSGLLKGISSAFSHSKSSRFDGCTIQEAHRIAKNGDLSPLSTIGDISGSFSSSACLPSPPHFQEGLFQRRQNLVEEIMQLSADSFSVASSDSNTSCSEVDYSDNEQSVPEIDNFLSKKYVNESVDEHISLNLPKDKFNDQSKGVIHVRENGINSFDLSADQTSKQCSNDFNAGDDNGESSYFVNQDAHHLMNRKSRKKAKKRFISILEESSNGNACNQDFDIVGKRQISANCKRKLDVDDASELSVSYCCNQDNNDLIVNYFNTNIADSEAHEICRHCVRCNCVLQREPTYKEREVAVLLSSHMKLYLLLITAATDESGTLLSLLSSHKAEEVCEVLVGMGLQVVRVNFEIGETYLFITRSIEKSRELLWTLQVSDLCGENDKCSIRSLEQVQVDLFDNQICGGSSVSIYQYAMVLVCCNDSKEESWLSRSLFVIGGYVLICIEDVMQLCSFSSDVSLSPYFRIDSCCSITDICEALLNLNVLQVIEVKERFLVTLVLVTSTQANVEVVNNGSTVSRSIRLKIQWFSRDNMLNFVSLLKAIHEEKMGSGLVVRCIS 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4503 1092 PANTHER NISCHARIN RELATED 2 1086 - -
Sto8g4503 1092 Pfam Leucine Rich repeats (2 copies) 193 232 IPR025875 -
Sto8g4503 1092 ProSiteProfiles Leucine-rich repeat profile. 214 235 IPR001611 GO:0005515
Sto8g4503 1092 SMART LRR_sd22_2 257 278 - -
Sto8g4503 1092 SMART LRR_sd22_2 212 233 - -
Sto8g4503 1092 SMART LRR_sd22_2 190 211 - -
Sto8g4503 1092 ProSiteProfiles Leucine-rich repeat profile. 192 213 IPR001611 GO:0005515
Sto8g4503 1092 SUPERFAMILY L domain-like 176 324 - -
Sto8g4503 1092 PANTHER OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN 2 1086 - -
Sto8g4503 1092 Coils Coil 402 422 - -
Sto8g4503 1092 Gene3D Ribonuclease Inhibitor 147 330 IPR032675 -
Sto8g4503 1092 ProSiteProfiles Leucine-rich repeat profile. 259 280 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4503 Sto-Chr8 47739374 47747474 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4503 - - gmx:100800812 1488.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g4503 8 47739374 47747474 Sto8g4503 8 47739374 47747474 ECH